chr3.CM0452.130.nd (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr3.CM0452.130.nd T010187_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0452.130.nd AP2 46 103

Links

Other AP2 family TFs
Other Lotus japonicus TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000803527 Malus domestica MDP0000803527 N 0.899
LjSGA_012098.1 Lotus japonicus LjSGA_012098.1 N 0.823
cassava19560.m1 Manihot esculenta cassava19560.m1 N 0.778
mgf017600m Mimulus guttatus mgf017600m N 0.758
POPTR_0006s04820 Populus trichocarpa POPTR_0006s04820 N 0.752
POPTR_0016s05670 Populus trichocarpa POPTR_0016s05670 N 0.752
PRUPE_ppa006202mg Prunus persica PRUPE_ppa006202mg N 0.752
ORUFI05G16140 Oryza rufipogon ORUFI05G16140 N 0.752
OPUNC05G13110 Oryza punctata OPUNC05G13110 N 0.752
OLONG_020459 Oryza longistaminata OLONG_020459 N 0.752
OMERI05G13370 Oryza meridionalis OMERI05G13370 N 0.752
ONIVA05G15390 Oryza nivara ONIVA05G15390 N 0.752
Sb09g019190 Sorghum bicolor Sb09g019190 N 0.752
30006.m000282 Ricinus communis 30006.m000282 N 0.752
gene02470-v1.0-hybrid Fragaria vesca gene02470-v1.0-hybrid N 0.752
Lus10000965.g Linum usitatissimum Lus10000965.g N 0.752
Lus10040140.g Linum usitatissimum Lus10040140.g N 0.752
Carubv10023272m.g Capsella rubella Carubv10023272m.g N 0.752
Bostr.11568s0008 Boechera stricta Bostr.11568s0008 N 0.752
MDP0000314518 Malus domestica MDP0000314518 N 0.752
OGLUM05G15890 Oryza glumaepatula OGLUM05G15890 N 0.752
cassava421.valid.m1 Manihot esculenta cassava421.valid.m1 N 0.752
VIT_08s0007g08580 Vitis vinifera VIT_08s0007g08580 N 0.752
TRIUR3_07433 Triticum urartu TRIUR3_07433 N 0.752
GRMZM2G013657 Zea mays GRMZM2G013657 N 0.752
LPERR05G11930 Leersia perrieri LPERR05G11930 N 0.752
BRADI2G26987 Brachypodium distachyon BRADI2G26987 N 0.752
Bo3g035770 Brassica oleracea Bo3g035770 N 0.752
BGIOSGA019793 Oryza indica BGIOSGA019793 N 0.752
MTR_7g091390 Medicago truncatula MTR_7g091390 N 0.752
F775_10869 Aegilops tauschii F775_10869 N 0.752
OB05G22940 Oryza brachyantha OB05G22940 N 0.752
OBART05G15060 Oryza barthii OBART05G15060 N 0.752
mgf019897m Mimulus guttatus mgf019897m N 0.748
AMTR_s00159p00062070 Amborella trichopoda AMTR_s00159p00062070 N 0.748
PK18855.1 Cannabis sativa PK18855.1 N 0.740
SapurV1A.0037s0030 Salix purpurea SapurV1A.0037s0030 N 0.739
orange1.1g018292m.g Citrus sinensis orange1.1g018292m.g N 0.737
Pavir.Ca01410 Panicum virgatum Pavir.Ca01410 N 0.737
fgenesh2_kg.4__2311__AT2G41710.2 Arabidopsis lyrata fgenesh2_kg.4__2311__AT2G41710.2 N 0.737
Pavir.Cb01456 Panicum virgatum Pavir.Cb01456 N 0.737
Cagra.0914s0005 Capsella grandiflora Cagra.0914s0005 N 0.737
Eucgr.A02341 Eucalyptus grandis Eucgr.A02341 N 0.737
Ciclev10005012m.g Citrus clementina Ciclev10005012m.g N 0.737
Bra004641 Brassica rapa Bra004641 N 0.737
Bo4g013420 Brassica oleracea Bo4g013420 N 0.737
ORGLA05G0129100 Oryza glaberrima ORGLA05G0129100 N 0.737
GLYMA03G29240 Glycine max GLYMA03G29240 N 0.737
Thhalv10016812m.g Eutrema salsugineum Thhalv10016812m.g N 0.737
TCM_024554 Theobroma cacao TCM_024554 N 0.737
Si021952m.g Setaria italica Si021952m.g N 0.737
PK12273.1 Cannabis sativa PK12273.1 N 0.737
evm.TU.supercontig_224.4 Carica papaya evm.TU.supercontig_224.4 N 0.737
SapurV1A.3066s0020 Salix purpurea SapurV1A.3066s0020 N 0.737
Gorai.003G091500 Gossypium raimondii Gorai.003G091500 N 0.737
AT2G41710 Arabidopsis thaliana AT2G41710 N 0.737
Ca_07237 Cicer arietinum Ca_07237 N 0.737
GLYMA19G31960 Glycine max GLYMA19G31960 N 0.737
MLOC_7325 Hordeum vulgare MLOC_7325 N 0.737
Aquca_009_00241 Aquilegia coerulea Aquca_009_00241 N 0.733
Cucsa.338170 Cucumis sativus Cucsa.338170 N 0.733
GLYMA02G33090 Glycine max GLYMA02G33090 N 0.729
Cla022214 Citrullus lanatus Cla022214 N 0.727
OLONG_002212 Oryza longistaminata OLONG_002212 N 0.722
BGIOSGA023402 Oryza indica BGIOSGA023402 N 0.722
OB06G31060 Oryza brachyantha OB06G31060 N 0.722
BBM Vitis vinifera VIT_04s0023g00950 N 0.722
OMERI06G23370 Oryza meridionalis OMERI06G23370 N 0.722
evm.TU.supercontig_99.39 Carica papaya evm.TU.supercontig_99.39 N 0.722
OBART06G23380 Oryza barthii OBART06G23380 N 0.722
PK15670.1 Cannabis sativa PK15670.1 N 0.719
cassava40681.m1 Manihot esculenta cassava40681.m1 N 0.713
OB03G42600 Oryza brachyantha OB03G42600 N 0.711
Lus10011730.g Linum usitatissimum Lus10011730.g N 0.709
Lus10039650.g Linum usitatissimum Lus10039650.g N 0.709
Cucsa.353040 Cucumis sativus Cucsa.353040 I 0.708
evm.TU.supercontig_129.70 Carica papaya evm.TU.supercontig_129.70 N 0.708
GRMZM2G146688 Zea mays GRMZM2G146688 N 0.706
30170.m013669 Ricinus communis 30170.m013669 N 0.706
Traes_6AS_53FA034C9 Triticum aestivum Traes_6AS_53FA034C9 N 0.682
Bra023921 Brassica rapa Bra023921 N 0.679