CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LjSGA_030627.1
(
Lotus japonicus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
LjSGA_030627.1
T010284_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_030627.1
AP2
25
82
SIYRGVTRHRWTGRFEAHLWDKSSWNNIQNKKGRQGAYDTEEAAARTYDLAALKYWGK
LjSGA_030627.1
AP2
124
155
SKYRGVARHHHNGRWEARIGRVCGNKYLYLGT
Links
Other
AP2
family TFs
Other
Lotus japonicus
TFs
242 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_8g044070
Medicago truncatula
MTR_8g044070
N
0.797
evm.TU.supercontig_54.28
Carica papaya
evm.TU.supercontig_54.28
N
0.785
cassava16315.m1
Manihot esculenta
cassava16315.m1
N
0.785
Pm017032
Prunus mume
Pm017032
N
0.784
WRI1
Arabidopsis lyrata
fgenesh2_kg.5__1822__AT3G54320.1
N
0.783
Bra003178
Brassica rapa
Bra003178
N
0.783
Bra007066
Brassica rapa
Bra007066
N
0.783
Thhalv10010394m.g
Eutrema salsugineum
Thhalv10010394m.g
N
0.783
30069.m000440
Ricinus communis
30069.m000440
N
0.782
SELMODRAFT_108361
Selaginella moellendorffii
SELMODRAFT_108361
N
0.781
SELMODRAFT_85823
Selaginella moellendorffii
SELMODRAFT_85823
N
0.781
orange1.1g036423m.g
Citrus sinensis
orange1.1g036423m.g
N
0.781
Ciclev10003896m.g
Citrus clementina
Ciclev10003896m.g
N
0.781
Cla020765
Citrullus lanatus
Cla020765
N
0.770
Ca_17532
Cicer arietinum
Ca_17532
N
0.768
GLYMA08G23630
Glycine max
GLYMA08G23630
I
0.768
MTR_4g007770
Medicago truncatula
MTR_4g007770
N
0.766
Pavir.J34903
Panicum virgatum
Pavir.J34903
N
0.760
Pavir.J08481
Panicum virgatum
Pavir.J08481
N
0.760
Si012026m.g
Setaria italica
Si012026m.g
N
0.759
Si026433m.g
Setaria italica
Si026433m.g
N
0.759
ORUFI08G18170
Oryza rufipogon
ORUFI08G18170
N
0.757
OB08G23780
Oryza brachyantha
OB08G23780
N
0.757
OGLUM08G17060
Oryza glumaepatula
OGLUM08G17060
N
0.757
ONIVA08G17820
Oryza nivara
ONIVA08G17820
N
0.757
OMERI08G13500
Oryza meridionalis
OMERI08G13500
N
0.757
LPERR08G13500
Leersia perrieri
LPERR08G13500
N
0.757
OPUNC08G14310
Oryza punctata
OPUNC08G14310
N
0.754
GRMZM2G124524
Zea mays
GRMZM2G124524
I
0.753
Sb05g001790
Sorghum bicolor
Sb05g001790
I
0.753
GLYMA08G24420
Glycine max
GLYMA08G24420
N
0.751
MTR_8g044040
Medicago truncatula
MTR_8g044040
N
0.750
GLYMA15G34770
Glycine max
GLYMA15G34770
N
0.748
evm.TU.supercontig_14.38
Carica papaya
evm.TU.supercontig_14.38
N
0.742
gene00377-v1.0-hybrid
Fragaria vesca
gene00377-v1.0-hybrid
N
0.741
Gorai.001G256900
Gossypium raimondii
Gorai.001G256900
N
0.741
PGSC0003DMG400027502
Solanum tuberosum
PGSC0003DMG400027502
N
0.739
MDP0000231748
Malus domestica
MDP0000231748
N
0.739
Pm013856
Prunus mume
Pm013856
N
0.739
gene15913-v1.0-hybrid
Fragaria vesca
gene15913-v1.0-hybrid
N
0.739
PRUPE_ppa007768mg
Prunus persica
PRUPE_ppa007768mg
N
0.739
Ca_20689
Cicer arietinum
Ca_20689
N
0.738
GLYMA06G30840
Glycine max
GLYMA06G30840
N
0.736
OGLUM09G11130
Oryza glumaepatula
OGLUM09G11130
I
0.736
OBART09G10730
Oryza barthii
OBART09G10730
N
0.736
MDP0000133423
Malus domestica
MDP0000133423
N
0.736
ORUFI09G11510
Oryza rufipogon
ORUFI09G11510
N
0.736
TCM_038442
Theobroma cacao
TCM_038442
N
0.736
GLYMA04G24010
Glycine max
GLYMA04G24010
N
0.736
OMERI09G08520
Oryza meridionalis
OMERI09G08520
N
0.736
gene27659-v1.0-hybrid
Fragaria vesca
gene27659-v1.0-hybrid
N
0.736
Si030129m.g
Setaria italica
Si030129m.g
I
0.736
Cla019044
Citrullus lanatus
Cla019044
N
0.736
MDP0000318457
Malus domestica
MDP0000318457
N
0.736
BRADI4G30617
Brachypodium distachyon
BRADI4G30617
I
0.736
AMTR_s00101p00022740
Amborella trichopoda
AMTR_s00101p00022740
N
0.736
LPERR09G07570
Leersia perrieri
LPERR09G07570
N
0.736
Gorai.011G225700
Gossypium raimondii
Gorai.011G225700
I
0.735
TCM_044588
Theobroma cacao
TCM_044588
I
0.735
Bo8g083590
Brassica oleracea
Bo8g083590
I
0.735
Cagra.0562s0024
Capsella grandiflora
Cagra.0562s0024
I
0.735
Bostr.0697s0045
Boechera stricta
Bostr.0697s0045
I
0.735
POPTR_0010s25340
Populus trichocarpa
POPTR_0010s25340
N
0.735
WRI1
Arabidopsis thaliana
AT3G54320
I
0.735
PK04008.1
Cannabis sativa
PK04008.1
I
0.735
Bo6g067950
Brassica oleracea
Bo6g067950
I
0.735
Carubv10018845m.g
Capsella rubella
Carubv10018845m.g
I
0.735
Ciclev10010237m.g
Citrus clementina
Ciclev10010237m.g
N
0.734
ONIVA09G10420
Oryza nivara
ONIVA09G10420
I
0.734
POPTR_0018s11110
Populus trichocarpa
POPTR_0018s11110
N
0.734
Sb02g025080
Sorghum bicolor
Sb02g025080
I
0.734
Ciclev10025985m.g
Citrus clementina
Ciclev10025985m.g
I
0.734
ORGLA09G0079700
Oryza glaberrima
ORGLA09G0079700
I
0.734
Traes_5BL_B6C71B544
Triticum aestivum
Traes_5BL_B6C71B544
I
0.734
OS09G0423800
Oryza sativa
OS09G0423800
I
0.734
TRIUR3_24036
Triticum urartu
TRIUR3_24036
N
0.734
Lus10001553.g
Linum usitatissimum
Lus10001553.g
N
0.734
BGIOSGA030783
Oryza indica
BGIOSGA030783
I
0.734
OB09G17420
Oryza brachyantha
OB09G17420
I
0.734
Lus10008939.g
Linum usitatissimum
Lus10008939.g
N
0.734
orange1.1g018990m.g
Citrus sinensis
orange1.1g018990m.g
I
0.734
chr6.CM0041.30.nd
Lotus japonicus
chr6.CM0041.30.nd
N
0.734
MTR_2g460730
Medicago truncatula
MTR_2g460730
N
0.734
e_gw1.32.189.1
Physcomitrella patens
e_gw1.32.189.1
N
0.733
Cla015555
Citrullus lanatus
Cla015555
N
0.733
mgf019814m
Mimulus guttatus
mgf019814m
N
0.731
GRMZM2G141219
Zea mays
GRMZM2G141219
I
0.731
SapurV1A.0153s0330
Salix purpurea
SapurV1A.0153s0330
I
0.731
SapurV1A.1603s0090
Salix purpurea
SapurV1A.1603s0090
I
0.731
SapurV1A.1535s0040
Salix purpurea
SapurV1A.1535s0040
I
0.731
PRUPE_ppa023152mg
Prunus persica
PRUPE_ppa023152mg
I
0.731
evm.TU.supercontig_199.10
Carica papaya
evm.TU.supercontig_199.10
I
0.731
mg013664m
Mimulus guttatus
mg013664m
N
0.731
POPTR_0001s03300
Populus trichocarpa
POPTR_0001s03300
I
0.731
Cucsa.170790
Cucumis sativus
Cucsa.170790
I
0.731
VIT_09s0018g01650
Vitis vinifera
VIT_09s0018g01650
I
0.731
Pm008629
Prunus mume
Pm008629
I
0.731
Gorai.006G025100
Gossypium raimondii
Gorai.006G025100
N
0.731
Gorai.012G098200
Gossypium raimondii
Gorai.012G098200
I
0.731
AMTR_s00019p00086450
Amborella trichopoda
AMTR_s00019p00086450
I
0.731
Lus10028880.g
Linum usitatissimum
Lus10028880.g
N
0.730
Cucsa.106090
Cucumis sativus
Cucsa.106090
N
0.730
GLYMA02G36880
Glycine max
GLYMA02G36880
I
0.729
Eucgr.F03987
Eucalyptus grandis
Eucgr.F03987
I
0.729
Aquca_048_00034
Aquilegia coerulea
Aquca_048_00034
I
0.729
TCM_027569
Theobroma cacao
TCM_027569
I
0.729
Pavir.Bb02213
Panicum virgatum
Pavir.Bb02213
I
0.729
GLYMA17G07860
Glycine max
GLYMA17G07860
I
0.729
GSMUA_Achr5G04670_001
Musa acuminata
GSMUA_Achr5G04670_001
N
0.726
GLYMA07G02380
Glycine max
GLYMA07G02380
I
0.726
cassava11368.m1
Manihot esculenta
cassava11368.m1
N
0.725
chr2.CM0225.20.nc
Lotus japonicus
chr2.CM0225.20.nc
N
0.725
POPTR_0017s11470
Populus trichocarpa
POPTR_0017s11470
N
0.725
MTR_6g011490
Medicago truncatula
MTR_6g011490
N
0.725
VIT_01s0026g01690
Vitis vinifera
VIT_01s0026g01690
N
0.725
VIT_14s0108g00050
Vitis vinifera
VIT_14s0108g00050
N
0.725
PRUPE_ppa024318mg
Prunus persica
PRUPE_ppa024318mg
N
0.725
29822.m003477
Ricinus communis
29822.m003477
N
0.725
PK26651.1
Cannabis sativa
PK26651.1
I
0.724
Solyc03g117720.2
Solanum lycopersicum
Solyc03g117720.2
I
0.723
Ca_10533
Cicer arietinum
Ca_10533
N
0.722
Lus10041618.g
Linum usitatissimum
Lus10041618.g
I
0.722
Bo6g124080
Brassica oleracea
Bo6g124080
N
0.722
Lus10024101.g
Linum usitatissimum
Lus10024101.g
I
0.722
Bostr.7128s0222
Boechera stricta
Bostr.7128s0222
N
0.719
Gorai.009G122000
Gossypium raimondii
Gorai.009G122000
I
0.719
ADAP
Arabidopsis lyrata
fgenesh2_kg.1__1760__AT1G16060.1
N
0.719
Cucsa.282940
Cucumis sativus
Cucsa.282940
N
0.719
GSMUA_Achr3G03630_001
Musa acuminata
GSMUA_Achr3G03630_001
I
0.719
Bra035137
Brassica rapa
Bra035137
I
0.717
Bostr.20129s0410
Boechera stricta
Bostr.20129s0410
I
0.717
fgenesh2_kg.2__2276__AT1G79700.2
Arabidopsis lyrata
fgenesh2_kg.2__2276__AT1G79700.2
I
0.716
Bo5g021520
Brassica oleracea
Bo5g021520
N
0.716
ORGLA08G0142100
Oryza glaberrima
ORGLA08G0142100
I
0.716
OS08G0442400
Oryza sativa
OS08G0442400
I
0.716
BGIOSGA028751
Oryza indica
BGIOSGA028751
I
0.716
Carubv10020688m.g
Capsella rubella
Carubv10020688m.g
N
0.716
Aquca_016_00348
Aquilegia coerulea
Aquca_016_00348
I
0.715
POPTR_0008s01260
Populus trichocarpa
POPTR_0008s01260
N
0.715
Gorai.012G056300
Gossypium raimondii
Gorai.012G056300
N
0.715
VIT_11s0037g00870
Vitis vinifera
VIT_11s0037g00870
N
0.715
OGLUM11G01480
Oryza glumaepatula
OGLUM11G01480
N
0.714
BGIOSGA036704
Oryza indica
BGIOSGA036704
N
0.714
BGIOSGA034580
Oryza indica
BGIOSGA034580
N
0.714
ONIVA03G39530
Oryza nivara
ONIVA03G39530
N
0.714
OPUNC12G01560
Oryza punctata
OPUNC12G01560
N
0.714
Gorai.009G008800
Gossypium raimondii
Gorai.009G008800
I
0.714
ORGLA12G0015400
Oryza glaberrima
ORGLA12G0015400
N
0.714
OMERI11G02080
Oryza meridionalis
OMERI11G02080
N
0.714
OPUNC11G01540
Oryza punctata
OPUNC11G01540
N
0.714
OMERI12G00060
Oryza meridionalis
OMERI12G00060
N
0.714
ONIVA11G01800
Oryza nivara
ONIVA11G01800
N
0.714
GRMZM2G174834
Zea mays
GRMZM2G174834
I
0.713
Eucgr.C00238
Eucalyptus grandis
Eucgr.C00238
N
0.713
Cagra.1725s0044
Capsella grandiflora
Cagra.1725s0044
I
0.711
ADAP
Arabidopsis thaliana
AT1G16060
I
0.711
Ca_03306
Cicer arietinum
Ca_03306
N
0.711
Thhalv10008118m.g
Eutrema salsugineum
Thhalv10008118m.g
I
0.711
Carubv10010918m.g
Capsella rubella
Carubv10010918m.g
N
0.710
Solyc06g068570.2
Solanum lycopersicum
Solyc06g068570.2
I
0.710
AT1G79700
Arabidopsis thaliana
AT1G79700
I
0.710
Bra026082
Brassica rapa
Bra026082
I
0.708
MTR_4g130270
Medicago truncatula
MTR_4g130270
I
0.706
30114.m000507
Ricinus communis
30114.m000507
N
0.706
Solyc12g010490.1
Solanum lycopersicum
Solyc12g010490.1
N
0.706
MTR_8g468920
Medicago truncatula
MTR_8g468920
N
0.705
BRADI4G43877
Brachypodium distachyon
BRADI4G43877
I
0.705
Traes_5DL_2CF55DD05
Triticum aestivum
Traes_5DL_2CF55DD05
I
0.705
Traes_5AL_F8DEBE8E7
Triticum aestivum
Traes_5AL_F8DEBE8E7
I
0.705
LPERR12G01610
Leersia perrieri
LPERR12G01610
N
0.704
F775_06373
Aegilops tauschii
F775_06373
N
0.704
POPTR_0006s19360
Populus trichocarpa
POPTR_0006s19360
N
0.703
SELMODRAFT_129793
Selaginella moellendorffii
SELMODRAFT_129793
N
0.703
OPUNC09G09320
Oryza punctata
OPUNC09G09320
N
0.703
TRIUR3_04644
Triticum urartu
TRIUR3_04644
N
0.702
SapurV1A.0070s0630
Salix purpurea
SapurV1A.0070s0630
N
0.702
Gorai.013G003400
Gossypium raimondii
Gorai.013G003400
I
0.702
mgf008907m
Mimulus guttatus
mgf008907m
I
0.700
OLONG_002862
Oryza longistaminata
OLONG_002862
N
0.700
chr2.CM0608.630.nc
Lotus japonicus
chr2.CM0608.630.nc
N
0.700
MTR_7g009410
Medicago truncatula
MTR_7g009410
N
0.698
Eucgr.J02131
Eucalyptus grandis
Eucgr.J02131
N
0.697
Lus10005253.g
Linum usitatissimum
Lus10005253.g
N
0.697
Lus10030671.g
Linum usitatissimum
Lus10030671.g
N
0.697
orange1.1g042319m.g
Citrus sinensis
orange1.1g042319m.g
N
0.697
Ciclev10013824m.g
Citrus clementina
Ciclev10013824m.g
N
0.697
mgf019116m
Mimulus guttatus
mgf019116m
N
0.697
TCM_018386
Theobroma cacao
TCM_018386
N
0.697
BRADI2G48130
Brachypodium distachyon
BRADI2G48130
N
0.697
ORGLA11G0014900
Oryza glaberrima
ORGLA11G0014900
I
0.695
AMTR_s00202p00017170
Amborella trichopoda
AMTR_s00202p00017170
N
0.695
OB11G11380
Oryza brachyantha
OB11G11380
I
0.695
OS12G0126300
Oryza sativa
OS12G0126300
I
0.695
Pm015847
Prunus mume
Pm015847
N
0.695
Pm006561
Prunus mume
Pm006561
N
0.695
OB12G11690
Oryza brachyantha
OB12G11690
I
0.695
PRUPE_ppa022978mg
Prunus persica
PRUPE_ppa022978mg
N
0.695
PRUPE_ppa022243mg
Prunus persica
PRUPE_ppa022243mg
N
0.695
POPTR_0010s10290
Populus trichocarpa
POPTR_0010s10290
N
0.695
Eucgr.J00316
Eucalyptus grandis
Eucgr.J00316
I
0.692
GLYMA18G16236
Glycine max
GLYMA18G16236
N
0.692
Traes_7AS_A70A185F1
Triticum aestivum
Traes_7AS_A70A185F1
N
0.692
Si007857m.g
Setaria italica
Si007857m.g
N
0.692
GLYMA08G40831
Glycine max
GLYMA08G40831
N
0.691
Sb10g003160
Sorghum bicolor
Sb10g003160
N
0.689
GRMZM2G073982
Zea mays
GRMZM2G073982
N
0.689
GSMUA_Achr8G09350_001
Musa acuminata
GSMUA_Achr8G09350_001
I
0.689
ORUFI06G03000
Oryza rufipogon
ORUFI06G03000
N
0.689
BGIOSGA021927
Oryza indica
BGIOSGA021927
N
0.689
SapurV1A.0036s0830
Salix purpurea
SapurV1A.0036s0830
N
0.689
OBART06G03040
Oryza barthii
OBART06G03040
N
0.689
ORGLA06G0029800
Oryza glaberrima
ORGLA06G0029800
N
0.689
Pavir.J19507
Panicum virgatum
Pavir.J19507
N
0.689
ONIVA06G03970
Oryza nivara
ONIVA06G03970
N
0.689
Pm015843
Prunus mume
Pm015843
N
0.688
TCM_011797
Theobroma cacao
TCM_011797
N
0.687
Gorai.008G182500
Gossypium raimondii
Gorai.008G182500
N
0.687
Ciclev10033673m.g
Citrus clementina
Ciclev10033673m.g
N
0.687
mgf017413m
Mimulus guttatus
mgf017413m
N
0.686
OBART12G01740
Oryza barthii
OBART12G01740
N
0.685
evm.TU.contig_28586.3
Carica papaya
evm.TU.contig_28586.3
N
0.685
GRMZM2G131266
Zea mays
GRMZM2G131266
N
0.685
MDP0000281784
Malus domestica
MDP0000281784
I
0.684
Traes_4AL_C863DCEDC
Triticum aestivum
Traes_4AL_C863DCEDC
N
0.684
cassava39084.m1
Manihot esculenta
cassava39084.m1
I
0.684
Lus10037209.g
Linum usitatissimum
Lus10037209.g
I
0.684
Lus10036719.g
Linum usitatissimum
Lus10036719.g
I
0.684
BRADI3G36820
Brachypodium distachyon
BRADI3G36820
N
0.683
Lus10013268.g
Linum usitatissimum
Lus10013268.g
N
0.683
MDP0000186581
Malus domestica
MDP0000186581
N
0.683
Lus10030792.g
Linum usitatissimum
Lus10030792.g
N
0.683
MDP0000297698
Malus domestica
MDP0000297698
N
0.683
Cagra.2238s0017
Capsella grandiflora
Cagra.2238s0017
N
0.682
Aquca_074_00065
Aquilegia coerulea
Aquca_074_00065
I
0.681
gene01262-v1.0-hybrid
Fragaria vesca
gene01262-v1.0-hybrid
I
0.681
PK24809.1
Cannabis sativa
PK24809.1
I
0.681
Solyc01g096860.1
Solanum lycopersicum
Solyc01g096860.1
I
0.680
POPTR_0003s18350
Populus trichocarpa
POPTR_0003s18350
N
0.679
Eucgr.I01921
Eucalyptus grandis
Eucgr.I01921
N
0.679
GLYMA09G37540
Glycine max
GLYMA09G37540
N
0.678
GLYMA18G49101
Glycine max
GLYMA18G49101
N
0.678
Solyc06g066390.1
Solanum lycopersicum
Solyc06g066390.1
N
0.677