CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_035548.1
(
Lotus japonicus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
LjSGA_035548.1
T010289_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_035548.1
AP2
16
67
LKYRGVRRRSSGKWVSEIREPKKPNRIWLGTFPTPEMAAIAYDVAALALKGK
Links
Other
AP2
family TFs
Other
Lotus japonicus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10023873.g
Linum usitatissimum
Lus10023873.g
N
0.745
Lus10014376.g
Linum usitatissimum
Lus10014376.g
N
0.745
29092.m000462
Ricinus communis
29092.m000462
N
0.739
HRD
Vitis vinifera
VIT_08s0007g03810
N
0.738
MDP0000195376
Malus domestica
MDP0000195376
N
0.735
GLYMA10G07740
Glycine max
GLYMA10G07740
N
0.728
SapurV1A.0154s0220
Salix purpurea
SapurV1A.0154s0220
N
0.727
POPTR_0016s02010
Populus trichocarpa
POPTR_0016s02010
N
0.723
POPTR_0006s02180
Populus trichocarpa
POPTR_0006s02180
N
0.720
GLYMA13G21560
Glycine max
GLYMA13G21560
N
0.719
GLYMA03G34970
Glycine max
GLYMA03G34970
N
0.717
GLYMA15G02900
Glycine max
GLYMA15G02900
N
0.717
GLYMA19G37670
Glycine max
GLYMA19G37670
N
0.717
Ca_00768
Cicer arietinum
Ca_00768
N
0.708
evm.TU.supercontig_5.71
Carica papaya
evm.TU.supercontig_5.71
N
0.705
Aquca_027_00393
Aquilegia coerulea
Aquca_027_00393
N
0.705
cassava32861.m1
Manihot esculenta
cassava32861.m1
N
0.704
MDP0000833641
Malus domestica
MDP0000833641
N
0.703
Pm026227
Prunus mume
Pm026227
N
0.700
PRUPE_ppa020711mg
Prunus persica
PRUPE_ppa020711mg
N
0.699
cassava21723.m1
Manihot esculenta
cassava21723.m1
N
0.699
Gorai.002G159400
Gossypium raimondii
Gorai.002G159400
N
0.696
Cucsa.083150
Cucumis sativus
Cucsa.083150
N
0.695
gene30159-v1.0-hybrid
Fragaria vesca
gene30159-v1.0-hybrid
N
0.688
Cla018653
Citrullus lanatus
Cla018653
N
0.683
Eucgr.K02071
Eucalyptus grandis
Eucgr.K02071
N
0.680