LjSGA_078116.1 (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 LjSGA_078116.1 T010301_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.716 0.755
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.707 0.816
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.707 0.816
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.707 0.816
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.679 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_078116.1 AP2 92 144

Links

Other AP2 family TFs
Other Lotus japonicus TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr3.CM0080.80.nd Lotus japonicus chr3.CM0080.80.nd I 0.847
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.778
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.772
Ca_06034 Cicer arietinum Ca_06034 I 0.768
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.767
MTR_7g081805 Medicago truncatula MTR_7g081805 I 0.760
MTR_7g081815 Medicago truncatula MTR_7g081815 I 0.760
Ca_06032 Cicer arietinum Ca_06032 I 0.760
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.759
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.743
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.743
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.740
chr3.CM0080.190.nd Lotus japonicus chr3.CM0080.190.nd I 0.740
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.737
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.735
Pm017696 Prunus mume Pm017696 I 0.734
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.734
MDP0000830129 Malus domestica MDP0000830129 I 0.730
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.729
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.728
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.727
GLYMA10G00990 Glycine max GLYMA10G00990 I 0.727
30174.m008755 Ricinus communis 30174.m008755 I 0.726
TCM_005706 Theobroma cacao TCM_005706 I 0.726
GLYMA18G48741 Glycine max GLYMA18G48741 I 0.726
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.725
Bo9g001020 Brassica oleracea Bo9g001020 I 0.723
Cla021851 Citrullus lanatus Cla021851 I 0.723
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.722
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.722
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.722
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.722
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.721
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.720
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.719
TCM_005707 Theobroma cacao TCM_005707 I 0.719
MDP0000930655 Malus domestica MDP0000930655 I 0.719
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.719
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.718
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.718
Pm017699 Prunus mume Pm017699 I 0.718
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.717
GLYMA20G34560 Glycine max GLYMA20G34560 I 0.717
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.717
cassava41639.m1 Manihot esculenta cassava41639.m1 I 0.717
GLYMA10G33070 Glycine max GLYMA10G33070 I 0.717
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.716
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.716
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.716
ERF098 Arabidopsis thaliana AT3G23230 D 0.716
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.716
MTR_1g074310 Medicago truncatula MTR_1g074310 I 0.715
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.715
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.712
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.711
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.711
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.711
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.710
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.708
Bra037630 Brassica rapa Bra037630 I 0.707
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.707
Bra004873 Brassica rapa Bra004873 I 0.707
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.707
ERF13 Arabidopsis thaliana AT2G44840 D 0.707
Bo4g024140 Brassica oleracea Bo4g024140 I 0.707
Bo4g195220 Brassica oleracea Bo4g195220 I 0.707
30174.m008756 Ricinus communis 30174.m008756 I 0.707
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.707
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I 0.707
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.707
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.707
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I 0.706
Cucsa.260040 Cucumis sativus Cucsa.260040 I 0.706
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I 0.706
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.705
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.705
POPTR_0014s04630 Populus trichocarpa POPTR_0014s04630 I 0.705
Ca_12080 Cicer arietinum Ca_12080 I 0.705
MTR_4g088005 Medicago truncatula MTR_4g088005 I 0.704
GLYMA03G26394 Glycine max GLYMA03G26394 I 0.704
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.704
SELMODRAFT_37123 Selaginella moellendorffii SELMODRAFT_37123 I 0.701
Solyc02g077370.1 Solanum lycopersicum Solyc02g077370.1 I 0.701
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.701
PGSC0003DMG400010724 Solanum tuberosum PGSC0003DMG400010724 I 0.701
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.701
SELMODRAFT_80895 Selaginella moellendorffii SELMODRAFT_80895 I 0.701
TCM_005705 Theobroma cacao TCM_005705 I 0.701
mgf021973m Mimulus guttatus mgf021973m I 0.700
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.700
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I 0.699
Pm020605 Prunus mume Pm020605 I 0.699
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I 0.698
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.697
Gorai.007G145700 Gossypium raimondii Gorai.007G145700 I 0.696
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.696
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I 0.695
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I 0.695
AMTR_s00021p00185480 Amborella trichopoda AMTR_s00021p00185480 I 0.695
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I 0.695
29900.m001559 Ricinus communis 29900.m001559 I 0.695
Lus10025430.g Linum usitatissimum Lus10025430.g I 0.694
SapurV1A.0233s0380 Salix purpurea SapurV1A.0233s0380 I 0.694
SapurV1A.1065s0020 Salix purpurea SapurV1A.1065s0020 I 0.694
LPERR02G21480 Leersia perrieri LPERR02G21480 I 0.694
SapurV1A.0094s0620 Salix purpurea SapurV1A.0094s0620 I 0.694
POPTR_0001s11770 Populus trichocarpa POPTR_0001s11770 I 0.694
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.692
Pavir.Aa01181 Panicum virgatum Pavir.Aa01181 I 0.692
ONIVA02G28840 Oryza nivara ONIVA02G28840 I 0.692
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.692
BGIOSGA008740 Oryza indica BGIOSGA008740 I 0.692
OGLUM02G26870 Oryza glumaepatula OGLUM02G26870 I 0.692
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.692
OBART02G26470 Oryza barthii OBART02G26470 I 0.692
Aquca_005_00143 Aquilegia coerulea Aquca_005_00143 I 0.692
GRMZM2G057386 Zea mays GRMZM2G057386 I 0.692
ORUFI02G27860 Oryza rufipogon ORUFI02G27860 I 0.692
Pavir.Ab02473 Panicum virgatum Pavir.Ab02473 I 0.692
Si017790m.g Setaria italica Si017790m.g I 0.692
ORGLA02G0226700 Oryza glaberrima ORGLA02G0226700 I 0.692
OPUNC02G24090 Oryza punctata OPUNC02G24090 I 0.692
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.691
30174.m008759 Ricinus communis 30174.m008759 I 0.691
POPTR_0005s24450 Populus trichocarpa POPTR_0005s24450 I 0.691
Gorai.007G046000 Gossypium raimondii Gorai.007G046000 I 0.690
mgf021215m Mimulus guttatus mgf021215m I 0.690
GLYMA15G08560 Glycine max GLYMA15G08560 I 0.690
GLYMA13G30720 Glycine max GLYMA13G30720 I 0.690
Eucgr.B01541 Eucalyptus grandis Eucgr.B01541 I 0.690
SapurV1A.0012s0890 Salix purpurea SapurV1A.0012s0890 I 0.690
PK28774.1 Cannabis sativa PK28774.1 I 0.690
POPTR_0004s05100 Populus trichocarpa POPTR_0004s05100 I 0.690
MTR_2g015040 Medicago truncatula MTR_2g015040 I 0.690
cassava1608.valid.m1 Manihot esculenta cassava1608.valid.m1 I 0.690
TCM_004062 Theobroma cacao TCM_004062 I 0.689
Eucgr.G00943 Eucalyptus grandis Eucgr.G00943 I 0.689
29584.m000235 Ricinus communis 29584.m000235 I 0.688
mgf026487m Mimulus guttatus mgf026487m I 0.688
TCM_029773 Theobroma cacao TCM_029773 I 0.687
cassava19171.valid.m1 Manihot esculenta cassava19171.valid.m1 I 0.687
TCM_004061 Theobroma cacao TCM_004061 I 0.687
Gorai.001G176700 Gossypium raimondii Gorai.001G176700 I 0.687
Cla010886 Citrullus lanatus Cla010886 I 0.686
MTR_1g070070 Medicago truncatula MTR_1g070070 I 0.686
MDP0000178398 Malus domestica MDP0000178398 I 0.685
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I 0.685
Cucsa.260030 Cucumis sativus Cucsa.260030 I 0.685
Cla015064 Citrullus lanatus Cla015064 I 0.685
orange1.1g031071m.g Citrus sinensis orange1.1g031071m.g I 0.685
Ciclev10016995m.g Citrus clementina Ciclev10016995m.g I 0.685
Ca_00359 Cicer arietinum Ca_00359 I 0.684
Lus10016209.g Linum usitatissimum Lus10016209.g I 0.684
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.684
OLONG_027600 Oryza longistaminata OLONG_027600 I 0.683
ONIVA04G03680 Oryza nivara ONIVA04G03680 I 0.683
OGLUM04G04620 Oryza glumaepatula OGLUM04G04620 I 0.683
ORGLA04G0041100 Oryza glaberrima ORGLA04G0041100 I 0.683
OB04G14270 Oryza brachyantha OB04G14270 I 0.683
LPERR04G03550 Leersia perrieri LPERR04G03550 I 0.683
ORUFI04G06330 Oryza rufipogon ORUFI04G06330 I 0.683
BGIOSGA015474 Oryza indica BGIOSGA015474 I 0.683
GSMUA_Achr1G15350_001 Musa acuminata GSMUA_Achr1G15350_001 I 0.683
OBART04G05450 Oryza barthii OBART04G05450 I 0.683
OS04G0257500 Oryza sativa OS04G0257500 I 0.683
cassava38545.m1 Manihot esculenta cassava38545.m1 I 0.683
POPTR_0010s08310 Populus trichocarpa POPTR_0010s08310 I 0.682
VIT_07s0005g03190 Vitis vinifera VIT_07s0005g03190 I 0.682
Bra014925 Brassica rapa Bra014925 I 0.682
mgf020878m Mimulus guttatus mgf020878m I 0.682
Bo7g040810 Brassica oleracea Bo7g040810 I 0.682
CM1489.90.nc Lotus japonicus CM1489.90.nc I 0.682
MDP0000189033 Malus domestica MDP0000189033 I 0.681
MDP0000907929 Malus domestica MDP0000907929 I 0.681
cassava47034.m1 Manihot esculenta cassava47034.m1 I 0.681
SapurV1A.0021s0990 Salix purpurea SapurV1A.0021s0990 I 0.681
MDP0000133485 Malus domestica MDP0000133485 I 0.681
SapurV1A.0292s0010 Salix purpurea SapurV1A.0292s0010 I 0.681
gene04916-v1.0-hybrid Fragaria vesca gene04916-v1.0-hybrid I 0.681
VIT_07s0005g03220 Vitis vinifera VIT_07s0005g03220 I 0.681
mgf001695m Mimulus guttatus mgf001695m I 0.680
Gorai.001G252700 Gossypium raimondii Gorai.001G252700 I 0.680
Gorai.001G252900 Gossypium raimondii Gorai.001G252900 I 0.680
Cla007696 Citrullus lanatus Cla007696 I 0.680
Cucsa.388540 Cucumis sativus Cucsa.388540 I 0.680
Gorai.001G051300 Gossypium raimondii Gorai.001G051300 I 0.680
VIT_15s0021g01590 Vitis vinifera VIT_15s0021g01590 I 0.680
OMERI03G03710 Oryza meridionalis OMERI03G03710 I 0.680
VIT_15s0021g01610 Vitis vinifera VIT_15s0021g01610 I 0.680
VIT_15s0021g01600 Vitis vinifera VIT_15s0021g01600 I 0.680
ERF2_TOBAC Nicotiana tabacum ERF2_TOBAC D 0.679
Lus10016224.g Linum usitatissimum Lus10016224.g I 0.679
Cla015065 Citrullus lanatus Cla015065 I 0.679
Lus10029318.g Linum usitatissimum Lus10029318.g I 0.679
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.679
MDP0000689946 Malus domestica MDP0000689946 I 0.678
Ca_17211 Cicer arietinum Ca_17211 I 0.678
PRUPE_ppa012014mg Prunus persica PRUPE_ppa012014mg I 0.678
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.678
MDP0000286915 Malus domestica MDP0000286915 I 0.678
Pm010368 Prunus mume Pm010368 I 0.678
Eucgr.E01571 Eucalyptus grandis Eucgr.E01571 I 0.678
MDP0000805422 Malus domestica MDP0000805422 I 0.678
Cucsa.129320 Cucumis sativus Cucsa.129320 I 0.678
Bostr.19424s0319 Boechera stricta Bostr.19424s0319 I 0.677
PRUPE_ppa016384mg Prunus persica PRUPE_ppa016384mg I 0.677
Pm003579 Prunus mume Pm003579 I 0.677