LjSGA_095655.1 (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 LjSGA_095655.1 T010303_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.720 0.809
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.690 0.787
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.690 0.787
ERF037
M00843_2.00 		Arabidopsis thaliana
NRCCGACRN
NYGTCGGYN		 PBM
Franco-Zorrilla et al.(2014)
At1g77200 		0.685 0.787
ERF037
M06599_2.00 		Arabidopsis thaliana
YCRCCGACAHHNNH
DNNDDTGTCGGYGR		 Dap-seq
OMalley et al.(2016)
AT1G77200_col_a 		0.685 0.787
ERF037
M06600_2.00 		Arabidopsis thaliana
NNYACCGACAHN
NDTGTCGGTRNN		 Dap-seq
OMalley et al.(2016)
AT1G77200_colamp_a 		0.685 0.787
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.683 0.787
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.683 0.787
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_095655.1 AP2 22 70

Links

Other AP2 family TFs
Other Lotus japonicus TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr1.CM0206.1000.nd Lotus japonicus chr1.CM0206.1000.nd I 0.812
GLYMA05G35741 Glycine max GLYMA05G35741 I 0.744
GLYMA08G03910 Glycine max GLYMA08G03910 I 0.743
Ca_05941 Cicer arietinum Ca_05941 I 0.743
chr4.CM0617.510.nd Lotus japonicus chr4.CM0617.510.nd I 0.743
MTR_8g102800 Medicago truncatula MTR_8g102800 I 0.743
Si017865m.g Setaria italica Si017865m.g I 0.736
Eucgr.C03785 Eucalyptus grandis Eucgr.C03785 I 0.736
GRMZM5G816314 Zea mays GRMZM5G816314 I 0.736
Sb04g032940 Sorghum bicolor Sb04g032940 I 0.736
GRMZM2G072926 Zea mays GRMZM2G072926 I 0.736
mgf022802m Mimulus guttatus mgf022802m I 0.733
mgf019024m Mimulus guttatus mgf019024m I 0.728
Cla017050 Citrullus lanatus Cla017050 I 0.727
Cucsa.116550 Cucumis sativus Cucsa.116550 I 0.727
Gorai.010G075300 Gossypium raimondii Gorai.010G075300 I 0.726
Gorai.001G008100 Gossypium raimondii Gorai.001G008100 I 0.726
Cla004187 Citrullus lanatus Cla004187 I 0.724
gene11882-v1.0-hybrid Fragaria vesca gene11882-v1.0-hybrid I 0.724
Pavir.Aa00833 Panicum virgatum Pavir.Aa00833 I 0.723
Si019772m.g Setaria italica Si019772m.g I 0.723
Pavir.Ab02603 Panicum virgatum Pavir.Ab02603 I 0.723
GLYMA01G13410 Glycine max GLYMA01G13410 I 0.722
Q8LKX0_MAIZE Zea mays Q8LKX0_MAIZE D 0.720
Pavir.Ia02208 Panicum virgatum Pavir.Ia02208 I 0.720
Si039427m.g Setaria italica Si039427m.g I 0.720
Sb01g029065 Sorghum bicolor Sb01g029065 I 0.720
GRMZM5G889719 Zea mays GRMZM5G889719 I 0.720
MTR_7g046260 Medicago truncatula MTR_7g046260 I 0.719
GSMUA_Achr10G14070_001 Musa acuminata GSMUA_Achr10G14070_001 I 0.719
GRMZM2G041839 Zea mays GRMZM2G041839 I 0.717
GRMZM2G048621 Zea mays GRMZM2G048621 I 0.717
Traes_1BL_E39CD252E Triticum aestivum Traes_1BL_E39CD252E I 0.717
F775_11989 Aegilops tauschii F775_11989 I 0.717
Traes_1AL_88D49649D Triticum aestivum Traes_1AL_88D49649D I 0.717
Ciclev10009138m.g Citrus clementina Ciclev10009138m.g I 0.716
orange1.1g041119m.g Citrus sinensis orange1.1g041119m.g I 0.716
Gorai.004G281600 Gossypium raimondii Gorai.004G281600 I 0.714
Cucsa.235510 Cucumis sativus Cucsa.235510 I 0.714
LPERR10G14320 Leersia perrieri LPERR10G14320 I 0.714
ONIVA10G21000 Oryza nivara ONIVA10G21000 I 0.711
GSMUA_Achr9G05860_001 Musa acuminata GSMUA_Achr9G05860_001 I 0.711
ORGLA10G0136200 Oryza glaberrima ORGLA10G0136200 I 0.711
OMERI08G00520 Oryza meridionalis OMERI08G00520 I 0.711
GRMZM5G806839 Zea mays GRMZM5G806839 I 0.711
OGLUM10G18570 Oryza glumaepatula OGLUM10G18570 I 0.711
OPUNC10G16830 Oryza punctata OPUNC10G16830 I 0.711
GSMUA_Achr2G09430_001 Musa acuminata GSMUA_Achr2G09430_001 I 0.710
Cla023465 Citrullus lanatus Cla023465 I 0.709
Solyc12g008350.1 Solanum lycopersicum Solyc12g008350.1 I 0.709
PGSC0003DMG400000365 Solanum tuberosum PGSC0003DMG400000365 I 0.709
Cucsa.312570 Cucumis sativus Cucsa.312570 I 0.707
GRMZM2G005301 Zea mays GRMZM2G005301 I 0.705
BRADI3G33355 Brachypodium distachyon BRADI3G33355 I 0.705
OGLUM02G09810 Oryza glumaepatula OGLUM02G09810 I 0.704
ORUFI02G09750 Oryza rufipogon ORUFI02G09750 I 0.704
OMERI02G10950 Oryza meridionalis OMERI02G10950 I 0.704
GRMZM2G047918 Zea mays GRMZM2G047918 I 0.704
F775_14820 Aegilops tauschii F775_14820 I 0.704
Traes_7DL_538583735 Triticum aestivum Traes_7DL_538583735 I 0.704
BRADI3G08790 Brachypodium distachyon BRADI3G08790 I 0.704
Pavir.Ab00844 Panicum virgatum Pavir.Ab00844 I 0.704
OPUNC02G08670 Oryza punctata OPUNC02G08670 I 0.704
Si007144m.g Setaria italica Si007144m.g I 0.704
ORGLA02G0087100 Oryza glaberrima ORGLA02G0087100 I 0.704
Si018188m.g Setaria italica Si018188m.g I 0.704
LPERR06G15020 Leersia perrieri LPERR06G15020 I 0.704
ONIVA02G10590 Oryza nivara ONIVA02G10590 I 0.704
GRMZM2G073047 Zea mays GRMZM2G073047 I 0.704
OPUNC02G24230 Oryza punctata OPUNC02G24230 I 0.701
OPUNC04G18530 Oryza punctata OPUNC04G18530 I 0.701
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I 0.701
ONIVA04G19090 Oryza nivara ONIVA04G19090 I 0.701
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I 0.701
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I 0.701
Si012254m.g Setaria italica Si012254m.g I 0.701
OS04G0550200 Oryza sativa OS04G0550200 I 0.701
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I 0.701
OS02G0657000 Oryza sativa OS02G0657000 I 0.701
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I 0.701
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I 0.701
LPERR02G21590 Leersia perrieri LPERR02G21590 I 0.701
OMERI02G25910 Oryza meridionalis OMERI02G25910 I 0.701
LPERR04G16900 Leersia perrieri LPERR04G16900 I 0.701
MLOC_3095 Hordeum vulgare MLOC_3095 I 0.701
BGIOSGA016884 Oryza indica BGIOSGA016884 I 0.701
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I 0.701
GRMZM2G172936 Zea mays GRMZM2G172936 I 0.701
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I 0.701
BRADI3G50630 Brachypodium distachyon BRADI3G50630 I 0.701
ONIVA02G28990 Oryza nivara ONIVA02G28990 I 0.701
OMERI04G17290 Oryza meridionalis OMERI04G17290 I 0.701
Pavir.Da00839 Panicum virgatum Pavir.Da00839 I 0.700
OS01G0200600 Oryza sativa OS01G0200600 I 0.698
OPUNC01G06210 Oryza punctata OPUNC01G06210 I 0.698
OGLUM01G07430 Oryza glumaepatula OGLUM01G07430 I 0.698
BGIOSGA002184 Oryza indica BGIOSGA002184 I 0.698
ORGLA01G0061000 Oryza glaberrima ORGLA01G0061000 I 0.698
BRADI1G38110 Brachypodium distachyon BRADI1G38110 I 0.698
ORUFI06G19350 Oryza rufipogon ORUFI06G19350 I 0.698
MLOC_17203 Hordeum vulgare MLOC_17203 I 0.698
OMERI06G18780 Oryza meridionalis OMERI06G18780 I 0.698
OMERI01G06530 Oryza meridionalis OMERI01G06530 I 0.698
ORUFI01G06970 Oryza rufipogon ORUFI01G06970 I 0.698
ONIVA01G08000 Oryza nivara ONIVA01G08000 I 0.698
OBART01G06440 Oryza barthii OBART01G06440 I 0.698
ONIVA06G21640 Oryza nivara ONIVA06G21640 I 0.698
Pavir.Eb00249 Panicum virgatum Pavir.Eb00249 I 0.697
Si002749m.g Setaria italica Si002749m.g I 0.697
Cucsa.121080 Cucumis sativus Cucsa.121080 I 0.697
Sb03g002630 Sorghum bicolor Sb03g002630 I 0.697
OB06G25840 Oryza brachyantha OB06G25840 I 0.695
Pavir.Aa00834 Panicum virgatum Pavir.Aa00834 I 0.693
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.691
evm.TU.supercontig_40.39 Carica papaya evm.TU.supercontig_40.39 I 0.690
mgf024816m Mimulus guttatus mgf024816m I 0.690
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I 0.690
ERF035 Arabidopsis thaliana AT3G60490 D 0.690
Pavir.Ab02601 Panicum virgatum Pavir.Ab02601 I 0.689
TRAES3BF073700060CFD_g Triticum aestivum TRAES3BF073700060CFD_g I 0.689
Carubv10017799m.g Capsella rubella Carubv10017799m.g I 0.688
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I 0.688
Gorai.003G063500 Gossypium raimondii Gorai.003G063500 I 0.687
GLYMA09G32730 Glycine max GLYMA09G32730 I 0.686
GLYMA01G35010 Glycine max GLYMA01G35010 I 0.686
Bo3g037480 Brassica oleracea Bo3g037480 I 0.686
BRADI5G17640 Brachypodium distachyon BRADI5G17640 I 0.686
Bra000366 Brassica rapa Bra000366 I 0.686
GSMUA_AchrUn_randomG24010_001 Musa acuminata GSMUA_AchrUn_randomG24010_001 I 0.686
ERF037 Arabidopsis thaliana AT1G77200 D 0.685
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I 0.685
Carubv10022336m.g Capsella rubella Carubv10022336m.g I 0.685
Bo6g083410 Brassica oleracea Bo6g083410 I 0.685
Thhalv10019064m.g Eutrema salsugineum Thhalv10019064m.g I 0.685
Bostr.20129s0154 Boechera stricta Bostr.20129s0154 I 0.685
AC187157.4_FG001 Zea mays AC187157.4_FG001 I 0.685
fgenesh2_kg.2__2014__AT1G77200.1 Arabidopsis lyrata fgenesh2_kg.2__2014__AT1G77200.1 I 0.685
Bo6g121150 Brassica oleracea Bo6g121150 I 0.685
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.684
F775_04501 Aegilops tauschii F775_04501 I 0.683
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.683
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.683
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I 0.683
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I 0.683
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.683
BRADI2G06180 Brachypodium distachyon BRADI2G06180 I 0.683
Traes_2BL_FC0F8A3DC Triticum aestivum Traes_2BL_FC0F8A3DC I 0.683
TCM_005639 Theobroma cacao TCM_005639 I 0.683
Traes_2AL_43491B9E0 Triticum aestivum Traes_2AL_43491B9E0 I 0.683
PK01156.1 Cannabis sativa PK01156.1 I 0.683
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.683
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.683
ERF034 Arabidopsis thaliana AT2G44940 D 0.683
Traes_2DL_A336122501 Triticum aestivum Traes_2DL_A336122501 I 0.683
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.683
Pm017610 Prunus mume Pm017610 I 0.683
cassava17387.m1 Manihot esculenta cassava17387.m1 I 0.683
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.683
30174.m008790 Ricinus communis 30174.m008790 I 0.683
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.683
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I 0.681
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I 0.681
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I 0.681
OMERI04G17270 Oryza meridionalis OMERI04G17270 I 0.681
ONIVA04G19060 Oryza nivara ONIVA04G19060 I 0.681
OPUNC04G18520 Oryza punctata OPUNC04G18520 I 0.681
OS04G0549800 Oryza sativa OS04G0549800 I 0.681
OBART04G20820 Oryza barthii OBART04G20820 I 0.681
BGIOSGA016883 Oryza indica BGIOSGA016883 I 0.681
Pm013463 Prunus mume Pm013463 I 0.680
GRMZM2G028969 Zea mays GRMZM2G028969 I 0.680
GSMUA_Achr6G26280_001 Musa acuminata GSMUA_Achr6G26280_001 I 0.680
Gorai.007G087100 Gossypium raimondii Gorai.007G087100 I 0.679
PK29340.1 Cannabis sativa PK29340.1 I 0.678
SapurV1A.0540s0020 Salix purpurea SapurV1A.0540s0020 I 0.678
29912.m005463 Ricinus communis 29912.m005463 I 0.678
POPTR_0018s09270 Populus trichocarpa POPTR_0018s09270 I 0.678
cassava29917.valid.m1 Manihot esculenta cassava29917.valid.m1 I 0.678
cassava11373.m1 Manihot esculenta cassava11373.m1 I 0.678
cassava10514.m1 Manihot esculenta cassava10514.m1 I 0.678
TCM_037811 Theobroma cacao TCM_037811 I 0.678
POPTR_0006s17670 Populus trichocarpa POPTR_0006s17670 I 0.678
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I 0.678
Lus10011123.g Linum usitatissimum Lus10011123.g I 0.678
Lus10043240.g Linum usitatissimum Lus10043240.g I 0.678
Lus10034949.g Linum usitatissimum Lus10034949.g I 0.678
MTR_6g088405 Medicago truncatula MTR_6g088405 I 0.677
LjSGA_100683.2.1 Lotus japonicus LjSGA_100683.2.1 I 0.677
OBART02G09680 Oryza barthii OBART02G09680 I 0.677
MTR_6g088425 Medicago truncatula MTR_6g088425 I 0.677
Pavir.Ga01094 Panicum virgatum Pavir.Ga01094 I 0.677
Bo4g024220 Brassica oleracea Bo4g024220 I 0.677
Bo4g195280 Brassica oleracea Bo4g195280 I 0.677
Bra004878 Brassica rapa Bra004878 I 0.677
Bra040333 Brassica rapa Bra040333 I 0.677
orange1.1g023148m.g Citrus sinensis orange1.1g023148m.g I 0.677
Ciclev10024602m.g Citrus clementina Ciclev10024602m.g I 0.677
Ca_17883 Cicer arietinum Ca_17883 I 0.677