LjT35E05.90.nd (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 LjT35E05.90.nd T010327_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD

HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.758 0.960
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC

GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.744 0.920
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN

NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.725 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT35E05.90.nd AP2 35 86

Links

Other AP2 family TFs
Other Lotus japonicus TFs

Invalid Input OrderBy

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action