LjT39B13.80.nc (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 LjT39B13.80.nc T010329_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.856 0.949
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.844 0.949
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.841 0.960
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.812 0.838
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT39B13.80.nc AP2 138 188
LjT39B13.80.nc AP2 230 281

Links

Other AP2 family TFs
Other Lotus japonicus TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28752.m000339 Ricinus communis 28752.m000339 I 0.864
29169.m000017 Ricinus communis 29169.m000017 I 0.844
29805.m001494 Ricinus communis 29805.m001494 I 0.858
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.863
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.804
AP2 Arabidopsis thaliana AT4G36920 I 0.856
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.856
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.834
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.837
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.863
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.835
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.847
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.863
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.833
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.839
Bo1g004960 Brassica oleracea Bo1g004960 I 0.856
Bo4g070350 Brassica oleracea Bo4g070350 I 0.838
Bo7g064000 Brassica oleracea Bo7g064000 I 0.798
Bo7g118400 Brassica oleracea Bo7g118400 I 0.856
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.804
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.856
Bra011741 Brassica rapa Bra011741 I 0.856
Bra011939 Brassica rapa Bra011939 I 0.838
Bra012139 Brassica rapa Bra012139 I 0.798
Bra017809 Brassica rapa Bra017809 I 0.856
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.810
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.838
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.858
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.846
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.804
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.841
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.856
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.856
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.841
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.804
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.844
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.863
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.815
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.841
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.863
Ca_02499 Cicer arietinum Ca_02499 I 0.865
Ca_09295 Cicer arietinum Ca_09295 I 0.856
Ca_12010 Cicer arietinum Ca_12010 I 0.843
Ca_14618 Cicer arietinum Ca_14618 I 0.838
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.854
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.863
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.794
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.818
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.863
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.812
Cla000716 Citrullus lanatus Cla000716 I 0.855
Cla018124 Citrullus lanatus Cla018124 I 0.861
Cla018549 Citrullus lanatus Cla018549 I 0.779
Cla020549 Citrullus lanatus Cla020549 I 0.794
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.846
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.784
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.855
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.861
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.860
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.821
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.838
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.865
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.841
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.800
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.855
F775_32962 Aegilops tauschii F775_32962 I 0.858
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.799
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.838
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.805
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.855
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.860
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.855
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.863
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.863
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.865
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.837
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.855
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.838
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.862
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.855
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.858
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.852
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.854
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.846
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.835
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.812
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.847
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.836
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.811
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.858
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.844
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.862
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.843
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.858
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.855
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.856
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.845
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.827
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.832
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.832
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.844
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.843
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.830
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.851
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.827
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.864
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.824
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.839
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.856
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.840
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.799
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.829
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.818
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.845
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.817
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.831
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.845
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.836
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.842
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.836
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.799
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.808
MDP0000137561 Malus domestica MDP0000137561 I 0.839
MDP0000163645 Malus domestica MDP0000163645 I 0.819
MDP0000181606 Malus domestica MDP0000181606 I 0.858
MDP0000200319 Malus domestica MDP0000200319 I 0.863
mgf005133m Mimulus guttatus mgf005133m I 0.820
mgf009315m Mimulus guttatus mgf009315m I 0.854
mgf010466m Mimulus guttatus mgf010466m I 0.820
mgf021945m Mimulus guttatus mgf021945m I 0.854
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.809
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.840
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.868
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.839
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.856
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.855
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.843
OB03G45870 Oryza brachyantha OB03G45870 I 0.827
OB06G29960 Oryza brachyantha OB06G29960 I 0.833
OBART07G08110 Oryza barthii OBART07G08110 I 0.839
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.835
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.847
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.833
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.839
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.839
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.799
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.835
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.847
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.833
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.839
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.839
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.835
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.847
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.833
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.835
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.847
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.863
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.835
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.839
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.818
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.863
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.812
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.847
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.863
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.839
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.835
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.847
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.833
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.839
OS03G0818800 Oryza sativa OS03G0818800 I 0.794
OS05G0121600 Oryza sativa OS05G0121600 I 0.863
OS07G0235800 Oryza sativa OS07G0235800 I 0.839
P93632_MAIZE Zea mays P93632_MAIZE D 0.812
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.836
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.803
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.863
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.863
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.844
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.819
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.814
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.844
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.863
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.855
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.855
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.842
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.863
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.843
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.864
PK02403.1 Cannabis sativa PK02403.1 I 0.855
PK07183.1 Cannabis sativa PK07183.1 I 0.863
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Pm000974 Prunus mume Pm000974 I 0.858
Pm002492 Prunus mume Pm002492 I 0.862
Pm030172 Prunus mume Pm030172 I 0.838
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.852
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.858
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.855
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.838
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.687
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.862
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.838
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.862
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.844
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.856
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.841
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.863
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.844
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.857
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.862
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.855
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.834
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.844
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.836
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.847
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.810
Si006371m.g Setaria italica Si006371m.g I 0.700
Si012635m.g Setaria italica Si012635m.g I 0.847
Si025305m.g Setaria italica Si025305m.g I 0.863
Si029636m.g Setaria italica Si029636m.g I 0.836
Si036068m.g Setaria italica Si036068m.g I 0.844
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.850
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.855
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.855
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.822
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.859
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
TCM_000665 Theobroma cacao TCM_000665 I 0.852
TCM_022077 Theobroma cacao TCM_022077 I 0.862
TCM_042000 Theobroma cacao TCM_042000 I 0.858
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.815
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.841
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.712
TOE3 Arabidopsis thaliana AT5G67180 I 0.804
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.804
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.855
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.858
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.858
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.858
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.702
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.862
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.841