CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra018868
(
Brassica rapa
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
Bra018868
T010420_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra018868.1-P
AP2
44
93
AKYKGVVQLPNGHWGAQIYTDHKRIWLGTFRSAAVAAAAYDSASIKIRSY
Bra018868.1-P
B3
171
282
FRKELTPSDVGKLNRLVIPKKYAVRYLPLLRDDQKEREEGEIVEDVEVVFYDRGMRQWKFRYCYWRSSQSFVFTSGWNGFVKEKSLKEKDAIVFYTCDVPTLEGQRKKFLMI
Links
Other
AP2,B3
family TFs
Other
Brassica rapa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra014282
Brassica rapa
Bra014282
N
0.803
Bra030476
Brassica rapa
Bra030476
N
0.791
Bo3g179890
Brassica oleracea
Bo3g179890
N
0.789
Bra018894
Brassica rapa
Bra018894
N
0.755
cassava14279.m1
Manihot esculenta
cassava14279.m1
N
0.721
Thhalv10012377m.g
Eutrema salsugineum
Thhalv10012377m.g
N
0.706
29650.m000279
Ricinus communis
29650.m000279
N
0.706