CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra018894
(
Brassica rapa
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
Bra018894
T010421_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra018894.1-P
AP2
43
92
TKYKGVVQQPNGHWGAQIYSEHRRIWLGTFKSAAEAAASYDSASIKLRGI
Bra018894.1-P
B3
176
287
FSKELTPSDVGKLNRLVIPKKHAVKHLPFISDGQKEREEGEIGGALDDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVREKRLKEKDAIVFYHCDVPTNVMTLQGQ
Links
Other
AP2,B3
family TFs
Other
Brassica rapa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g179890
Brassica oleracea
Bo3g179890
N
0.831
Bra014282
Brassica rapa
Bra014282
N
0.817
Bra018868
Brassica rapa
Bra018868
N
0.755
cassava14279.m1
Manihot esculenta
cassava14279.m1
N
0.707
29650.m000279
Ricinus communis
29650.m000279
N
0.701