GLYMA10G34760 (Glycine max)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
GLYMA10G34760 T010438_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAV1
M06692_2.00
Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN

NNHHMDDDWDDWWTHTGTTGN
Dap-seq
OMalley et al.(2016)
RAV1_colamp_a
0.832 0.832
RAV1
M06693_2.00
Arabidopsis thaliana
VCAACADAWWHHAYNHB

VDNRTDDWWTHTGTTGB
Dap-seq
OMalley et al.(2016)
RAV1_col
0.832 0.832
RAV1
M02649_2.00
Arabidopsis thaliana
VNSCAACAKWDN

NHWMTGTTGSNB
SELEX
Mathelier et al.(2014)
MA0582.1
0.832 0.832
RAV1
M02650_2.00
Arabidopsis thaliana
NHCWCCTGRNNH

DNNYCAGGWGDN
SELEX
Mathelier et al.(2014)
MA0583.1
0.832 0.832
RAV1
M09748_2.00
Arabidopsis thaliana
VNSCAACAKWDN

NHWMTGTTGSNB
Transfac
Matys et al.(2006)
P$RAV1_01
0.832 0.832
RAV1
M09749_2.00
Arabidopsis thaliana
NHCWCCTGRNNH

DNNYCAGGWGDN
Transfac
Matys et al.(2006)
P$RAV1_02
0.832 0.832
ARF14
M01648_2.00
Arabidopsis thaliana
RCAACAKA

TMTGTTGY
PBM
Weirauch et al.(2014)
pTH8727
0.785 0.785
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G34760.1 AP2 52 101
GLYMA10G34760.1 B3 172 285

Links

Other AP2,B3 family TFs
Other Glycine max TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.953
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.947
Ca_08436 Cicer arietinum Ca_08436 I 0.927
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.899
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.886
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.886
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.879
Pm029015 Prunus mume Pm029015 I 0.879
MDP0000128924 Malus domestica MDP0000128924 I 0.879
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.873
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.873
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.873
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.872
29738.m001050 Ricinus communis 29738.m001050 I 0.867
MDP0000939633 Malus domestica MDP0000939633 I 0.867
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.866
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.866
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.859
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.859
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.859
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.859
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.859
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.853
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.853
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.852
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.852
Ca_24123 Cicer arietinum Ca_24123 I 0.852
TCM_011862 Theobroma cacao TCM_011862 I 0.852
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.847
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.847
PK15652.1 Cannabis sativa PK15652.1 I 0.847
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.847
RAV2 Arabidopsis thaliana AT1G68840 D 0.847
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.847
Cla020675 Citrullus lanatus Cla020675 I 0.847
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.846
mgf019592m Mimulus guttatus mgf019592m I 0.846
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.840
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.840
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.839
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.839
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.839
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.839
Bra024735 Brassica rapa Bra024735 I 0.839
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.839
Bo5g043120 Brassica oleracea Bo5g043120 I 0.839
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.839
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.839
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.833
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.832
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.832
Bo3g138550 Brassica oleracea Bo3g138550 I 0.832
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.829
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.829
Bra011002 Brassica rapa Bra011002 I 0.827
RAV1 Arabidopsis thaliana AT1G13260 D 0.827
Cla000872 Citrullus lanatus Cla000872 I 0.826
Bra019821 Brassica rapa Bra019821 I 0.826
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.826
Bra026917 Brassica rapa Bra026917 I 0.826
Bo5g015210 Brassica oleracea Bo5g015210 I 0.826
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.826
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.824
Bra038346 Brassica rapa Bra038346 I 0.820
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.820
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.819
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.819
Bo2g061320 Brassica oleracea Bo2g061320 I 0.813
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.812
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.812
OS05G0549800 Oryza sativa OS05G0549800 I 0.812
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.812
Si024576m.g Setaria italica Si024576m.g I 0.812
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.807
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.805
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.805
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.805
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.803
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.793
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.792
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.792
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.788
OBART01G27360 Oryza barthii OBART01G27360 I 0.788
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.788
OS01G0693400 Oryza sativa OS01G0693400 I 0.788
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.788
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.788
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.788
Bo2g138650 Brassica oleracea Bo2g138650 I 0.787
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.786
Bra026509 Brassica rapa Bra026509 I 0.785
GRMZM2G159592 Zea mays GRMZM2G159592 I 0.785
ARF14 Arabidopsis thaliana AT3G25730 D 0.785
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I 0.785
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.785
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.782
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.779
OB01G12600 Oryza brachyantha OB01G12600 I 0.779
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.779
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.779
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.779
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.779
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.776
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I 0.773
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.772
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.772
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.772
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.772
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.772
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.770
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.765
LPERR01G02360 Leersia perrieri LPERR01G02360 I 0.765
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I 0.762
OPUNC01G02240 Oryza punctata OPUNC01G02240 I 0.760
Si001909m.g Setaria italica Si001909m.g I 0.758
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.758
Eucgr.D00053 Eucalyptus grandis Eucgr.D00053 I 0.758
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.758
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.752
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.752
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.752
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.752
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.752
Si004045m.g Setaria italica Si004045m.g I 0.750
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.745
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.745
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.745
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.745
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.745
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.745
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.745
OBART01G02610 Oryza barthii OBART01G02610 I 0.745
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.745
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.745
OS01G0140700 Oryza sativa OS01G0140700 I 0.745
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.745
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.745
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.745
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.745
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I 0.745
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.738
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.738
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.738
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.738
TCM_019508 Theobroma cacao TCM_019508 I 0.738
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.738
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.738
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.738
Pm015500 Prunus mume Pm015500 I 0.733
PRUPE_ppa026046mg Prunus persica PRUPE_ppa026046mg I 0.733
Eucgr.L01673 Eucalyptus grandis Eucgr.L01673 I 0.733
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.733
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.732
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I 0.732
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.732
OS01G0141000 Oryza sativa OS01G0141000 I 0.732
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.732
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.732
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.732
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.732
LPERR01G02380 Leersia perrieri LPERR01G02380 I 0.732
gene10330-v1.0-hybrid Fragaria vesca gene10330-v1.0-hybrid N 0.727
e_gw1.63.77.1 Physcomitrella patens e_gw1.63.77.1 I 0.726
MDP0000945267 Malus domestica MDP0000945267 I 0.720
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.718
Bra025159 Brassica rapa Bra025159 I 0.712
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.711
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I 0.711
GSMUA_AchrUn_randomG06880_001 Musa acuminata GSMUA_AchrUn_randomG06880_001 I 0.711
gw1.135.126.1 Physcomitrella patens gw1.135.126.1 I 0.705
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.700
Sb09g004140 Sorghum bicolor Sb09g004140 N 0.700