CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC01G02270
(
Oryza punctata
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
OPUNC01G02270
T010484_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC01G02270.1
AP2
60
109
SRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEAAARAYDVAALRYRGR
OPUNC01G02270.1
B3
175
277
FEKAVTPSDVGKLNRLVVPKQHAEKHFPLSGAPTPPPPPPPRPPARACSSTSRTARGSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYGPDKLLFIDCKKN
Links
Other
AP2,B3
family TFs
Other
Oryza punctata
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI01G02500
Oryza meridionalis
OMERI01G02500
I
0.853
ONIVA01G02990
Oryza nivara
ONIVA01G02990
I
0.853
OS01G0141000
Oryza sativa
OS01G0141000
I
0.853
BGIOSGA002753
Oryza indica
BGIOSGA002753
I
0.853
BGIOSGA002748
Oryza indica
BGIOSGA002748
I
0.853
ORUFI01G02680
Oryza rufipogon
ORUFI01G02680
I
0.853
LPERR01G02380
Leersia perrieri
LPERR01G02380
I
0.825
ORGLA01G0022600
Oryza glaberrima
ORGLA01G0022600
I
0.813
Pavir.J23476
Panicum virgatum
Pavir.J23476
I
0.762
Si001909m.g
Setaria italica
Si001909m.g
I
0.762
Pavir.Eb00702
Panicum virgatum
Pavir.Eb00702
I
0.738
Pavir.Ea00549
Panicum virgatum
Pavir.Ea00549
I
0.736
Traes_3B_DF7E92499
Triticum aestivum
Traes_3B_DF7E92499
I
0.727
TRAES3BF098200010CFD_g
Triticum aestivum
TRAES3BF098200010CFD_g
I
0.727
Traes_3B_DF7E924991
Triticum aestivum
Traes_3B_DF7E924991
I
0.727
TRAES3BF108500010CFD_g
Triticum aestivum
TRAES3BF108500010CFD_g
I
0.727
TRAES3BF098300010CFD_g
Triticum aestivum
TRAES3BF098300010CFD_g
I
0.727
Pavir.J00384
Panicum virgatum
Pavir.J00384
I
0.722
Sb03g006590
Sorghum bicolor
Sb03g006590
I
0.718
BRADI2G02710
Brachypodium distachyon
BRADI2G02710
I
0.713
MLOC_75135
Hordeum vulgare
MLOC_75135
I
0.713
Pavir.Ca01165
Panicum virgatum
Pavir.Ca01165
I
0.708
ORUFI01G02660
Oryza rufipogon
ORUFI01G02660
I
0.706
OGLUM01G02850
Oryza glumaepatula
OGLUM01G02850
I
0.706
OBART01G02610
Oryza barthii
OBART01G02610
I
0.706
OMERI01G02480
Oryza meridionalis
OMERI01G02480
I
0.706
ONIVA01G02970
Oryza nivara
ONIVA01G02970
I
0.706
OS01G0140700
Oryza sativa
OS01G0140700
I
0.706
BGIOSGA002747
Oryza indica
BGIOSGA002747
I
0.706
ORGLA01G0022400
Oryza glaberrima
ORGLA01G0022400
I
0.706
Traes_3B_90BE2090B
Triticum aestivum
Traes_3B_90BE2090B
I
0.705
MLOC_7940
Hordeum vulgare
MLOC_7940
I
0.705
BRADI2G02720
Brachypodium distachyon
BRADI2G02720
I
0.700