OS01G0693400 (Oryza sativa)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
OS01G0693400 T010495_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAV1
M06692_2.00
Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN

NNHHMDDDWDDWWTHTGTTGN
Dap-seq
OMalley et al.(2016)
RAV1_colamp_a
0.781 0.781
RAV1
M06693_2.00
Arabidopsis thaliana
VCAACADAWWHHAYNHB

VDNRTDDWWTHTGTTGB
Dap-seq
OMalley et al.(2016)
RAV1_col
0.781 0.781
RAV1
M02649_2.00
Arabidopsis thaliana
VNSCAACAKWDN

NHWMTGTTGSNB
SELEX
Mathelier et al.(2014)
MA0582.1
0.781 0.781
RAV1
M02650_2.00
Arabidopsis thaliana
NHCWCCTGRNNH

DNNYCAGGWGDN
SELEX
Mathelier et al.(2014)
MA0583.1
0.781 0.781
RAV1
M09748_2.00
Arabidopsis thaliana
VNSCAACAKWDN

NHWMTGTTGSNB
Transfac
Matys et al.(2006)
P$RAV1_01
0.781 0.781
RAV1
M09749_2.00
Arabidopsis thaliana
NHCWCCTGRNNH

DNNYCAGGWGDN
Transfac
Matys et al.(2006)
P$RAV1_02
0.781 0.781
ARF14
M01648_2.00
Arabidopsis thaliana
RCAACAKA

TMTGTTGY
PBM
Weirauch et al.(2014)
pTH8727
0.774 0.774
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS01T0693400-01 AP2 80 129
OS01T0693400-01 B3 216 321

Links

Other AP2,B3 family TFs
Other Oryza sativa TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RAV2 Arabidopsis thaliana AT1G68840 D 0.767
RAV1 Arabidopsis thaliana AT1G13260 D 0.760
ARF14 Arabidopsis thaliana AT3G25730 D 0.774
Ca_24123 Cicer arietinum Ca_24123 I 0.801
Ca_08436 Cicer arietinum Ca_08436 I 0.795
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I 0.713
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.788
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.781
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.745
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.767
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.733
Cla000872 Citrullus lanatus Cla000872 I 0.760
Cla020675 Citrullus lanatus Cla020675 I 0.774
Pm015500 Prunus mume Pm015500 I 0.719
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.767
mgf019592m Mimulus guttatus mgf019592m I 0.788
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.774
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.767
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.801
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.781
29738.m001050 Ricinus communis 29738.m001050 I 0.795
Pm029015 Prunus mume Pm029015 I 0.808
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.767
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.774
Si001909m.g Setaria italica Si001909m.g I 0.760
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.733
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.733
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.767
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.788
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.856
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.925
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.788
Si004045m.g Setaria italica Si004045m.g I 0.884
Si024576m.g Setaria italica Si024576m.g I 0.870
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.781
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.767
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.767
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.774
TCM_019508 Theobroma cacao TCM_019508 I 0.719
TCM_011862 Theobroma cacao TCM_011862 I 0.788
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.795
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.767
PRUPE_ppa026046mg Prunus persica PRUPE_ppa026046mg I 0.700
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.774
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.760
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.884
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.767
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I 0.760
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.877
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.753
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.863
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.740
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.795
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.770
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.870
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.767
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.788
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.774
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.760
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.781
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.781
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.760
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.760
MDP0000945267 Malus domestica MDP0000945267 I 0.712
MDP0000939633 Malus domestica MDP0000939633 I 0.787
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.781
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.774
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.788
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.788
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.781
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.788
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.760
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.767
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.747
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.795
MDP0000128924 Malus domestica MDP0000128924 I 0.808
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.788
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.745
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.774
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.788
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.774
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.808
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.760
PK15652.1 Cannabis sativa PK15652.1 I 0.800
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.753
GRMZM2G159592 Zea mays GRMZM2G159592 I 0.836
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.863
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.795
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.788
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.788
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.781
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.781
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.774
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.932
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I 0.726
LPERR01G02360 Leersia perrieri LPERR01G02360 I 0.795
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I 0.733
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.740
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.815
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.788
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.760
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.767
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.753
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.911
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.808
Bo3g138550 Brassica oleracea Bo3g138550 I 0.774
Bo2g138650 Brassica oleracea Bo2g138650 I 0.740
Bo2g061320 Brassica oleracea Bo2g061320 I 0.747
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.884
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.760
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.760
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.774
BGIOSGA000982 Oryza indica BGIOSGA000982 I 0.863
Bo5g015210 Brassica oleracea Bo5g015210 I 0.781
Bo5g043120 Brassica oleracea Bo5g043120 I 0.767
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.781
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.781
Bra038346 Brassica rapa Bra038346 I 0.747
Bra026917 Brassica rapa Bra026917 I 0.781
Bra026509 Brassica rapa Bra026509 I 0.733
Bra024735 Brassica rapa Bra024735 I 0.767
Bra019821 Brassica rapa Bra019821 I 0.781
Bra011002 Brassica rapa Bra011002 I 0.767
LPERR01G02380 Leersia perrieri LPERR01G02380 I 0.760
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.973
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.808
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 1.000
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.747
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.774
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.890
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 1.000
OPUNC01G02240 Oryza punctata OPUNC01G02240 I 0.781
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.884
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 1.000
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.774
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.760
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.765
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.788
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I 0.747
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.801
OS05G0549800 Oryza sativa OS05G0549800 I 0.884
OS01G0141000 Oryza sativa OS01G0141000 I 0.760
OS01G0140700 Oryza sativa OS01G0140700 I 0.774
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 1.000
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.760
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.870
OB01G12600 Oryza brachyantha OB01G12600 I 0.774
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.788
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.795
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.774
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.747
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.774
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.745
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.772
OBART01G02610 Oryza barthii OBART01G02610 I 0.774
OBART01G27360 Oryza barthii OBART01G27360 I 1.000
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.774
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.774
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.904
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 1.000
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.760
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.774
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.904
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.993
gene10330-v1.0-hybrid Fragaria vesca gene10330-v1.0-hybrid N 0.719
Sb09g004140 Sorghum bicolor Sb09g004140 N 0.712
F775_20035 Aegilops tauschii F775_20035 N 0.719