OS01G0693400 (Oryza sativa)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
OS01G0693400 T010495_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAV1
M06692_2.00
Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN

NNHHMDDDWDDWWTHTGTTGN
Dap-seq
OMalley et al.(2016)
RAV1_colamp_a
0.781 0.781
RAV1
M06693_2.00
Arabidopsis thaliana
VCAACADAWWHHAYNHB

VDNRTDDWWTHTGTTGB
Dap-seq
OMalley et al.(2016)
RAV1_col
0.781 0.781
RAV1
M02649_2.00
Arabidopsis thaliana
VNSCAACAKWDN

NHWMTGTTGSNB
SELEX
Mathelier et al.(2014)
MA0582.1
0.781 0.781
RAV1
M02650_2.00
Arabidopsis thaliana
NHCWCCTGRNNH

DNNYCAGGWGDN
SELEX
Mathelier et al.(2014)
MA0583.1
0.781 0.781
RAV1
M09748_2.00
Arabidopsis thaliana
VNSCAACAKWDN

NHWMTGTTGSNB
Transfac
Matys et al.(2006)
P$RAV1_01
0.781 0.781
RAV1
M09749_2.00
Arabidopsis thaliana
NHCWCCTGRNNH

DNNYCAGGWGDN
Transfac
Matys et al.(2006)
P$RAV1_02
0.781 0.781
ARF14
M01648_2.00
Arabidopsis thaliana
RCAACAKA

TMTGTTGY
PBM
Weirauch et al.(2014)
pTH8727
0.774 0.774
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS01T0693400-01 AP2 80 129
OS01T0693400-01 B3 216 321

Links

Other AP2,B3 family TFs
Other Oryza sativa TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
COCC4DRAFT_70902 Bipolaris maydis COCC4DRAFT_70902 N 0.000
COCMIDRAFT_41534 Bipolaris oryzae COCMIDRAFT_41534 N 0.000
COCSADRAFT_152957 Bipolaris sorokiniana COCSADRAFT_152957 N 0.000
COCVIDRAFT_36480 Bipolaris victoriae COCVIDRAFT_36480 N 0.000
COCCADRAFT_32469 Bipolaris zeicola COCCADRAFT_32469 N 0.000
estExt_fgenesh1_pg.C_120111 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_120111 N 0.000
PTRG_03739 Pyrenophora triticirepentis PTRG_03739 N 0.000
SETTUDRAFT_38504 Setosphaeria turcica SETTUDRAFT_38504 N 0.000