CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_66538
(
Selaginella moellendorffii
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
SELMODRAFT_66538
T010517_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ31564
AP2
5
54
SQYKGVVPQPNGRFGAQIYEKHQRVWLGTFDTEVEAAKAYDVAATKIRGN
EFJ31564
B3
133
236
FFKVVTPSDVGKLNRLVIPKHHAERCFPLAPHEKGLLLSFEDERGKHWRFRYSYWSSSQSYVLTRGWSRFVKDKQLQVGDAVFFDRATTAGSSCKLFIHWKRKA
Links
Other
AP2,B3
family TFs
Other
Selaginella moellendorffii
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_71153
Selaginella moellendorffii
SELMODRAFT_71153
N
1.000
SELMODRAFT_133669
Selaginella moellendorffii
SELMODRAFT_133669
I
0.727
SELMODRAFT_110104
Selaginella moellendorffii
SELMODRAFT_110104
I
0.727
MTR_5g053920
Medicago truncatula
MTR_5g053920
I
0.713
Ca_24123
Cicer arietinum
Ca_24123
I
0.707
GSMUA_Achr5G09950_001
Musa acuminata
GSMUA_Achr5G09950_001
I
0.707
BRADI2G47220
Brachypodium distachyon
BRADI2G47220
I
0.707
e_gw1.63.77.1
Physcomitrella patens
e_gw1.63.77.1
I
0.705
Pavir.Ca01826
Panicum virgatum
Pavir.Ca01826
I
0.705
Pavir.J13012
Panicum virgatum
Pavir.J13012
I
0.705
Aquca_026_00225
Aquilegia coerulea
Aquca_026_00225
I
0.700
Gorai.005G138100
Gossypium raimondii
Gorai.005G138100
I
0.700
cassava12324.valid.m1
Manihot esculenta
cassava12324.valid.m1
I
0.700
OPUNC05G22370
Oryza punctata
OPUNC05G22370
I
0.700
MTR_1g093600
Medicago truncatula
MTR_1g093600
I
0.700
Pm029015
Prunus mume
Pm029015
I
0.700
PRUPE_ppa006243mg
Prunus persica
PRUPE_ppa006243mg
I
0.700