Traes_3B_90BE2090B (Triticum aestivum)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
Traes_3B_90BE2090B T010529_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF14
M01648_2.00
Arabidopsis thaliana
RCAACAKA

TMTGTTGY
PBM
Weirauch et al.(2014)
pTH8727
0.758 0.758
RAV1
M06692_2.00
Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN

NNHHMDDDWDDWWTHTGTTGN
Dap-seq
OMalley et al.(2016)
RAV1_colamp_a
0.745 0.745
RAV1
M06693_2.00
Arabidopsis thaliana
VCAACADAWWHHAYNHB

VDNRTDDWWTHTGTTGB
Dap-seq
OMalley et al.(2016)
RAV1_col
0.745 0.745
RAV1
M02649_2.00
Arabidopsis thaliana
VNSCAACAKWDN

NHWMTGTTGSNB
SELEX
Mathelier et al.(2014)
MA0582.1
0.745 0.745
RAV1
M02650_2.00
Arabidopsis thaliana
NHCWCCTGRNNH

DNNYCAGGWGDN
SELEX
Mathelier et al.(2014)
MA0583.1
0.745 0.745
RAV1
M09748_2.00
Arabidopsis thaliana
VNSCAACAKWDN

NHWMTGTTGSNB
Transfac
Matys et al.(2006)
P$RAV1_01
0.745 0.745
RAV1
M09749_2.00
Arabidopsis thaliana
NHCWCCTGRNNH

DNNYCAGGWGDN
Transfac
Matys et al.(2006)
P$RAV1_02
0.745 0.745
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_3B_90BE2090B.1 AP2 53 102
Traes_3B_90BE2090B.1 B3 167 275

Links

Other AP2,B3 family TFs
Other Triticum aestivum TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
csin103739 Clonorchis sinensis csin103739 N 0.000
SCUD_0000460601 Schistosoma curassoni SCUD_0000460601 N 0.000
Sjc_0079020 Schistosoma japonicum Sjc_0079020 N 0.000
SMRZ_0001458101 Schistosoma margrebowiei SMRZ_0001458101 N 0.000
SMTD_0000290601 Schistosoma mattheei SMTD_0000290601 N 0.000
SROB_0001536001 Schistosoma rodhaini SROB_0001536001 N 0.000
T265_15215 Opisthorchis viverrini T265_15215 N 0.000