CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_11s0037g00010
(
Vitis vinifera
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
VIT_11s0037g00010
T010540_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_11s0037g00010.t01
AP2
45
94
GRFKGVVPQQNGHWGAQIYANHQRIWLGTYKSETEAAMAYDSAAIKLRSG
VIT_11s0037g00010.t01
B3
169
280
FQKELTPSDVGKLNRLVIPKKYATKHFPPISESAEENEVGGAAADMQLVFYDRLMRLWKFRYCYWRSSQSYVFTRGWNRFVKDKELNENDIVTFYLCEYGQGTKEGRTFCMI
Links
Other
AP2,B3
family TFs
Other
Vitis vinifera
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.C00358
Eucalyptus grandis
Eucgr.C00358
N
0.818
orange1.1g046898m.g
Citrus sinensis
orange1.1g046898m.g
N
0.796
Ciclev10017535m.g
Citrus clementina
Ciclev10017535m.g
N
0.796
Gorai.013G249100
Gossypium raimondii
Gorai.013G249100
N
0.771
29650.m000279
Ricinus communis
29650.m000279
N
0.766
cassava14279.m1
Manihot esculenta
cassava14279.m1
N
0.750
LjSGA_031594.1
Lotus japonicus
LjSGA_031594.1
N
0.746
cassava27051.m1
Manihot esculenta
cassava27051.m1
N
0.746
PRUPE_ppa026651mg
Prunus persica
PRUPE_ppa026651mg
N
0.746
Pm028198
Prunus mume
Pm028198
N
0.746
gene24427-v1.0-hybrid
Fragaria vesca
gene24427-v1.0-hybrid
N
0.736
evm.TU.contig_32277
Carica papaya
evm.TU.contig_32277
N
0.719
POPTR_0003s21810
Populus trichocarpa
POPTR_0003s21810
N
0.714
POPTR_0018s11780
Populus trichocarpa
POPTR_0018s11780
N
0.714
Bra014282
Brassica rapa
Bra014282
N
0.711
Bo3g179890
Brassica oleracea
Bo3g179890
N
0.711
Cucsa.350980
Cucumis sativus
Cucsa.350980
N
0.711
Cla019009
Citrullus lanatus
Cla019009
N
0.711
PK28088.1
Cannabis sativa
PK28088.1
N
0.702