Cla019009 (Citrullus lanatus)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
Cla019009 T010545_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla019009 AP2 44 93
Cla019009 B3 167 281

Links

Other AP2,B3 family TFs
Other Citrullus lanatus TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.350980 Cucumis sativus Cucsa.350980 N 0.966
Ciclev10010403m.g Citrus clementina Ciclev10010403m.g N 0.812
orange1.1g018549m.g Citrus sinensis orange1.1g018549m.g N 0.805
POPTR_0018s11780 Populus trichocarpa POPTR_0018s11780 N 0.791
Ciclev10017535m.g Citrus clementina Ciclev10017535m.g N 0.782
orange1.1g046898m.g Citrus sinensis orange1.1g046898m.g N 0.782
gene24427-v1.0-hybrid Fragaria vesca gene24427-v1.0-hybrid N 0.778
Pm028198 Prunus mume Pm028198 N 0.775
PRUPE_ppa026651mg Prunus persica PRUPE_ppa026651mg N 0.775
Eucgr.C00358 Eucalyptus grandis Eucgr.C00358 N 0.769
LjSGA_031594.1 Lotus japonicus LjSGA_031594.1 N 0.754
29650.m000279 Ricinus communis 29650.m000279 N 0.752
PK28088.1 Cannabis sativa PK28088.1 N 0.752
evm.TU.contig_32277 Carica papaya evm.TU.contig_32277 N 0.747
Gorai.013G249100 Gossypium raimondii Gorai.013G249100 N 0.743
28008.m000029 Ricinus communis 28008.m000029 N 0.732
cassava14279.m1 Manihot esculenta cassava14279.m1 N 0.729
SapurV1A.2134s0020 Salix purpurea SapurV1A.2134s0020 N 0.725
Aquca_011_00122 Aquilegia coerulea Aquca_011_00122 N 0.723
Solyc03g083110.1 Solanum lycopersicum Solyc03g083110.1 N 0.717
POPTR_0006s20040 Populus trichocarpa POPTR_0006s20040 N 0.713
cassava8667.m1 Manihot esculenta cassava8667.m1 N 0.711
VIT_11s0037g00010 Vitis vinifera VIT_11s0037g00010 N 0.711
Bra014282 Brassica rapa Bra014282 N 0.704
Bo3g179890 Brassica oleracea Bo3g179890 N 0.704
cassava27051.m1 Manihot esculenta cassava27051.m1 N 0.704
POPTR_0003s21810 Populus trichocarpa POPTR_0003s21810 N 0.700