CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28192.m000250
(
Ricinus communis
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
28192.m000250
T010553_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28192.m000250
AP2
28
77
SKFRGVILLRSGKWGARIAYKYKAYWLGTYDIEEEAAIAYDRAAIKLQRS
28192.m000250
B3
142
256
FRKELTQTDVTHIKGFHIPKDHAIEYFPPLVGANSGIGHENGNNNKSIDLIFYDKHCRPWTFRYSYWKSTQTYVFTKGWRHFLKMNDLRTKDSVFFYKCEYQGKTGGRVFYMIDV
Links
Other
AP2,B3
family TFs
Other
Ricinus communis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava33306.m1
Manihot esculenta
cassava33306.m1
N
0.804
cassava4890.m1
Manihot esculenta
cassava4890.m1
N
0.764