cassava14279.m1 (Manihot esculenta)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
cassava14279.m1 T010557_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14279.m1 AP2 54 103
cassava14279.m1 B3 187 298

Links

Other AP2,B3 family TFs
Other Manihot esculenta TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29650.m000279 Ricinus communis 29650.m000279 N 0.843
cassava27051.m1 Manihot esculenta cassava27051.m1 N 0.800
Gorai.013G249100 Gossypium raimondii Gorai.013G249100 N 0.786
Pm028198 Prunus mume Pm028198 N 0.779
PRUPE_ppa026651mg Prunus persica PRUPE_ppa026651mg N 0.779
POPTR_0003s21810 Populus trichocarpa POPTR_0003s21810 N 0.779
orange1.1g046898m.g Citrus sinensis orange1.1g046898m.g N 0.771
Ciclev10017535m.g Citrus clementina Ciclev10017535m.g N 0.771
SapurV1A.0009s0070 Salix purpurea SapurV1A.0009s0070 N 0.764
Eucgr.C00358 Eucalyptus grandis Eucgr.C00358 N 0.757
gene24427-v1.0-hybrid Fragaria vesca gene24427-v1.0-hybrid N 0.757
VIT_11s0037g00010 Vitis vinifera VIT_11s0037g00010 N 0.750
Ciclev10010403m.g Citrus clementina Ciclev10010403m.g N 0.750
orange1.1g018549m.g Citrus sinensis orange1.1g018549m.g N 0.750
evm.TU.contig_32277 Carica papaya evm.TU.contig_32277 N 0.747
Aquca_011_00122 Aquilegia coerulea Aquca_011_00122 N 0.736
Aquca_142_00013 Aquilegia coerulea Aquca_142_00013 N 0.729
Cla019009 Citrullus lanatus Cla019009 N 0.729
LjSGA_031594.1 Lotus japonicus LjSGA_031594.1 N 0.721
Cucsa.350980 Cucumis sativus Cucsa.350980 N 0.721
Bra018868 Brassica rapa Bra018868 N 0.721
Bra014282 Brassica rapa Bra014282 N 0.721
Bo3g179890 Brassica oleracea Bo3g179890 N 0.714
Bra018894 Brassica rapa Bra018894 N 0.707
cassava8667.m1 Manihot esculenta cassava8667.m1 N 0.707