CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava8667.m1
(
Manihot esculenta
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
cassava8667.m1
T010562_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava8667.m1
AP2
45
94
TKFRGVVAHQNGHWGSQIYFDHQRIWLGTFKSEKEAAMAYDSAALKLRSG
cassava8667.m1
B3
168
268
FQKELTPSDVGKLNRLVIPKKFATKFFPSMSEVDQENGVDDRQLAFYDKAMKLWKFRYCYWRSSQSYVFTRGWNGFVKEKKLKANDTICFSLCECRENSKN
Links
Other
AP2,B3
family TFs
Other
Manihot esculenta
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28008.m000029
Ricinus communis
28008.m000029
N
0.817
PRUPE_ppa026651mg
Prunus persica
PRUPE_ppa026651mg
N
0.732
Pm028198
Prunus mume
Pm028198
N
0.732
orange1.1g018549m.g
Citrus sinensis
orange1.1g018549m.g
N
0.718
SapurV1A.2134s0020
Salix purpurea
SapurV1A.2134s0020
N
0.711
Cla019009
Citrullus lanatus
Cla019009
N
0.711
29650.m000279
Ricinus communis
29650.m000279
N
0.710
gene24427-v1.0-hybrid
Fragaria vesca
gene24427-v1.0-hybrid
N
0.708
cassava14279.m1
Manihot esculenta
cassava14279.m1
N
0.707
Gorai.013G249100
Gossypium raimondii
Gorai.013G249100
N
0.704