TF Information

Ciclev10012300m.g *(Citrus clementina)* AP2,B3
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00847 (AP2) PF02362 (B3)	IPR001471 IPR003340	Ciclev10012300m.g	T010583_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
RAV1 M06692_2.00	Arabidopsis thaliana	NCAACADAWWHHWHHHKDDNN	NNHHMDDDWDDWWTHTGTTGN	Dap-seq OMalley et al.(2016) RAV1_colamp_a	0.748	0.748
RAV1 M06693_2.00	Arabidopsis thaliana	VCAACADAWWHHAYNHB	VDNRTDDWWTHTGTTGB	Dap-seq OMalley et al.(2016) RAV1_col	0.748	0.748
RAV1 M02649_2.00	Arabidopsis thaliana	VNSCAACAKWDN	NHWMTGTTGSNB	SELEX Mathelier et al.(2014) MA0582.1	0.748	0.748
RAV1 M02650_2.00	Arabidopsis thaliana	NHCWCCTGRNNH	DNNYCAGGWGDN	SELEX Mathelier et al.(2014) MA0583.1	0.748	0.748
RAV1 M09748_2.00	Arabidopsis thaliana	VNSCAACAKWDN	NHWMTGTTGSNB	Transfac Matys et al.(2006) P$RAV1_01	0.748	0.748
RAV1 M09749_2.00	Arabidopsis thaliana	NHCWCCTGRNNH	DNNYCAGGWGDN	Transfac Matys et al.(2006) P$RAV1_02	0.748	0.748
ARF14 M01648_2.00	Arabidopsis thaliana	RCAACAKA	TMTGTTGY	PBM Weirauch et al.(2014) pTH8727	0.735	0.735
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ciclev10012300m	AP2	31	80	SKYKGVVPQPNGRWGAQIYEKHQRVWLGTFIEEEEAARVYDTAALRFRGQ
Ciclev10012300m	B3	164	265	FEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGVLLNFEDSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSIVGSNSKLFIDCK

Links
Other AP2,B3 family TFs
Other *Citrus clementina* TFs

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149 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action