CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_46.140
(
Carica papaya
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
evm.TU.supercontig_46.140
T010591_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_46.140
AP2
46
95
SKFKGLVPQPNGHWGAQIYINYQRIWLGTFKSETEAAMAYDSAALKLRTK
evm.model.supercontig_46.140
B3
169
278
FHKELTPSDVSKLNRLVIPKKFAVKNFPNISGNAYYNGNLSDIQLIFYDRDMRVWKFRYCYWTSSESYVFTRGWNQFVKDKQLKAGEIVTFYECTPSKKTNEEASNNFWV
Links
Other
AP2,B3
family TFs
Other
Carica papaya
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.350980
Cucumis sativus
Cucsa.350980
N
0.705