gene10330-v1.0-hybrid (Fragaria vesca)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
gene10330-v1.0-hybrid T010593_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna10330.1-v1.0-hybrid AP2 21 70
mrna10330.1-v1.0-hybrid B3 142 246

Links

Other AP2,B3 family TFs
Other Fragaria vesca TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000945267 Malus domestica MDP0000945267 I 0.833
Pm015500 Prunus mume Pm015500 I 0.820
PRUPE_ppa026046mg Prunus persica PRUPE_ppa026046mg I 0.820
MDP0000153589 Malus domestica MDP0000153589 N 0.780
MDP0000321569 Malus domestica MDP0000321569 N 0.760
MDP0000223137 Malus domestica MDP0000223137 N 0.740
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.733
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.733
Ca_24123 Cicer arietinum Ca_24123 I 0.733
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.733
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.733
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.730
Pm029015 Prunus mume Pm029015 I 0.727
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.727
mgf019592m Mimulus guttatus mgf019592m I 0.727
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.727
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.727
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.727
29738.m001050 Ricinus communis 29738.m001050 I 0.727
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.727
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.726
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.720
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.720
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.720
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.720
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.720
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.720
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I 0.720
TCM_019508 Theobroma cacao TCM_019508 I 0.720
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.719
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.719
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.719
OBART01G27360 Oryza barthii OBART01G27360 I 0.719
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.719
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.719
OS01G0693400 Oryza sativa OS01G0693400 I 0.719
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.716
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I 0.715
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.713
PK15652.1 Cannabis sativa PK15652.1 I 0.713
MDP0000939633 Malus domestica MDP0000939633 I 0.713
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.713
MDP0000128924 Malus domestica MDP0000128924 I 0.713
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.713
Ca_08436 Cicer arietinum Ca_08436 I 0.713
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.713
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.713
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.713
Cla000872 Citrullus lanatus Cla000872 I 0.711
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.707
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.707
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.707
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.707
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.707
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.707
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.707
Bo3g138550 Brassica oleracea Bo3g138550 I 0.707
Bra011002 Brassica rapa Bra011002 I 0.707
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.707
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.707
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.707
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.707
Si024576m.g Setaria italica Si024576m.g I 0.707
Cla020675 Citrullus lanatus Cla020675 I 0.707
TCM_011862 Theobroma cacao TCM_011862 I 0.707
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.707
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.707
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.707
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.705
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.705
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.701
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.701
RAV2 Arabidopsis thaliana AT1G68840 D 0.700
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.700
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.700
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.700
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.700
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.700
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.700
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.700
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.700
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.700
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.700
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.700