gene24427-v1.0-hybrid (Fragaria vesca)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
gene24427-v1.0-hybrid T010594_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna24427.1-v1.0-hybrid AP2 53 102
mrna24427.1-v1.0-hybrid B3 180 287

Links

Other AP2,B3 family TFs
Other Fragaria vesca TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pm028198 Prunus mume Pm028198 N 0.861
PRUPE_ppa026651mg Prunus persica PRUPE_ppa026651mg N 0.861
orange1.1g018549m.g Citrus sinensis orange1.1g018549m.g N 0.819
Ciclev10010403m.g Citrus clementina Ciclev10010403m.g N 0.812
29650.m000279 Ricinus communis 29650.m000279 N 0.792
Gorai.013G249100 Gossypium raimondii Gorai.013G249100 N 0.778
Cla019009 Citrullus lanatus Cla019009 N 0.778
Ciclev10017535m.g Citrus clementina Ciclev10017535m.g N 0.775
orange1.1g046898m.g Citrus sinensis orange1.1g046898m.g N 0.775
evm.TU.contig_32277 Carica papaya evm.TU.contig_32277 N 0.774
Cucsa.350980 Cucumis sativus Cucsa.350980 N 0.771
cassava14279.m1 Manihot esculenta cassava14279.m1 N 0.757
cassava27051.m1 Manihot esculenta cassava27051.m1 N 0.754
LjSGA_031594.1 Lotus japonicus LjSGA_031594.1 N 0.750
Eucgr.C00358 Eucalyptus grandis Eucgr.C00358 N 0.743
Bo3g179890 Brassica oleracea Bo3g179890 N 0.739
SapurV1A.2134s0020 Salix purpurea SapurV1A.2134s0020 N 0.736
VIT_11s0037g00010 Vitis vinifera VIT_11s0037g00010 N 0.736
28008.m000029 Ricinus communis 28008.m000029 N 0.736
Bra014282 Brassica rapa Bra014282 N 0.732
PK28088.1 Cannabis sativa PK28088.1 N 0.722
POPTR_0006s20040 Populus trichocarpa POPTR_0006s20040 N 0.715
POPTR_0003s21810 Populus trichocarpa POPTR_0003s21810 N 0.715
cassava8667.m1 Manihot esculenta cassava8667.m1 N 0.708
SapurV1A.0009s0070 Salix purpurea SapurV1A.0009s0070 N 0.704
Aquca_011_00122 Aquilegia coerulea Aquca_011_00122 N 0.703
Gorai.009G020300 Gossypium raimondii Gorai.009G020300 N 0.701