CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G020300
(
Gossypium raimondii
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
Gorai.009G020300
T010600_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G020300.1
AP2
43
92
SQYKGVMRQKNGQWGAQLYANHTRIWLGTFKSEIDAAMAYDSAAIKFRTE
Gorai.009G020300.1
B3
162
275
FQKELTPSDVGKLNRLVIPKKYAVKYFSPVFGTENENADVGDRKTNDVELVFYDKFMRIWKVRYCYWNSSQSFVFTRGWNRFLKEKELKAKDVVSFFVCECRKENDVQRFCMID
Links
Other
AP2,B3
family TFs
Other
Gossypium raimondii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.013G204000
Gossypium raimondii
Gorai.013G204000
N
0.844
Ciclev10010403m.g
Citrus clementina
Ciclev10010403m.g
N
0.703
orange1.1g018549m.g
Citrus sinensis
orange1.1g018549m.g
N
0.703
gene24427-v1.0-hybrid
Fragaria vesca
gene24427-v1.0-hybrid
N
0.701