CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10036282.g
(
Linum usitatissimum
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
Lus10036282.g
T010606_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10036282
AP2
53
102
SKFKGVVPQQNGHWGCQIYANHQRIWLGTFKSEKEAAMAYDSAALKLRSS
Lus10036282
B3
175
284
FHKELTPSDVSKLNRLVIPKRSATMHFPKVPETEGVEEDNMQLSFYDRSLKTRWSFRYCYWKSSQSFVFTRGWNRFVRENNLKAKDTISFHECERHHGATSERFYMIDVN
Links
Other
AP2,B3
family TFs
Other
Linum usitatissimum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa026651mg
Prunus persica
PRUPE_ppa026651mg
N
0.725
Pm028198
Prunus mume
Pm028198
N
0.725
Ciclev10010403m.g
Citrus clementina
Ciclev10010403m.g
N
0.713
29650.m000279
Ricinus communis
29650.m000279
N
0.703
POPTR_0018s11780
Populus trichocarpa
POPTR_0018s11780
N
0.703
orange1.1g018549m.g
Citrus sinensis
orange1.1g018549m.g
N
0.700