CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000153589
(
Malus domestica
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
MDP0000153589
T010610_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000153589
AP2
31
80
SSYKGVVPQSNGRWGAQIYEKSHRVWLGTFDDEEEAAKTYNIASLKFRGL
MDP0000153589
B3
165
269
FEKVATPSDVGRLNRMVIPKQHAEKHFQVHLSVGFGKGVLLKFEDELGNVWRFGYCYWSSSQSYVLSKGWIRFVKEKKLKAGDVVRFERSVGEDKKLFIDCRPRN
Links
Other
AP2,B3
family TFs
Other
Malus domestica
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000321569
Malus domestica
MDP0000321569
N
0.933
MDP0000223137
Malus domestica
MDP0000223137
N
0.887
MDP0000945267
Malus domestica
MDP0000945267
I
0.847
PRUPE_ppa026046mg
Prunus persica
PRUPE_ppa026046mg
I
0.833
Pm015500
Prunus mume
Pm015500
I
0.833
gene10330-v1.0-hybrid
Fragaria vesca
gene10330-v1.0-hybrid
N
0.780
TCM_019508
Theobroma cacao
TCM_019508
I
0.733
Ciclev10012300m.g
Citrus clementina
Ciclev10012300m.g
I
0.721
VIT_01s0011g03070
Vitis vinifera
VIT_01s0011g03070
I
0.720
Cagra.1157s0007
Capsella grandiflora
Cagra.1157s0007
I
0.713
AMTR_s00007p00238950
Amborella trichopoda
AMTR_s00007p00238950
I
0.713
Aquca_002_01106
Aquilegia coerulea
Aquca_002_01106
I
0.713
Bra038346
Brassica rapa
Bra038346
I
0.713
orange1.1g021945m.g
Citrus sinensis
orange1.1g021945m.g
I
0.709
Carubv10020536m.g
Capsella rubella
Carubv10020536m.g
I
0.707
Thhalv10019566m.g
Eutrema salsugineum
Thhalv10019566m.g
I
0.707
SapurV1A.1001s0020
Salix purpurea
SapurV1A.1001s0020
I
0.707
Aquca_026_00225
Aquilegia coerulea
Aquca_026_00225
I
0.707
SapurV1A.3302s0010
Salix purpurea
SapurV1A.3302s0010
I
0.707
cassava43329.valid.m1
Manihot esculenta
cassava43329.valid.m1
I
0.707
GLYMA02G11060
Glycine max
GLYMA02G11060
I
0.707
MTR_5g053920
Medicago truncatula
MTR_5g053920
I
0.707
Bo2g061320
Brassica oleracea
Bo2g061320
I
0.707
Ca_24123
Cicer arietinum
Ca_24123
I
0.707
29738.m001050
Ricinus communis
29738.m001050
I
0.707
Pm029015
Prunus mume
Pm029015
I
0.707
PRUPE_ppa006243mg
Prunus persica
PRUPE_ppa006243mg
I
0.707
Gorai.013G080000
Gossypium raimondii
Gorai.013G080000
I
0.705
Solyc05g009790.1
Solanum lycopersicum
Solyc05g009790.1
I
0.700
RAV2
Arabidopsis lyrata
fgenesh2_kg.2__1141__AT1G68840.1
I
0.700
Ciclev10031846m.g
Citrus clementina
Ciclev10031846m.g
I
0.700
MTR_1g093600
Medicago truncatula
MTR_1g093600
I
0.700
orange1.1g017035m.g
Citrus sinensis
orange1.1g017035m.g
I
0.700
Bostr.10273s0485
Boechera stricta
Bostr.10273s0485
I
0.700
Gorai.008G185900
Gossypium raimondii
Gorai.008G185900
I
0.700
TEM1
Arabidopsis lyrata
scaffold_102941.1
I
0.700