SapurV1A.1001s0020 (Salix purpurea)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
SapurV1A.1001s0020 T010637_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAV1
M06692_2.00
Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN

NNHHMDDDWDDWWTHTGTTGN
Dap-seq
OMalley et al.(2016)
RAV1_colamp_a
0.860 0.860
RAV1
M06693_2.00
Arabidopsis thaliana
VCAACADAWWHHAYNHB

VDNRTDDWWTHTGTTGB
Dap-seq
OMalley et al.(2016)
RAV1_col
0.860 0.860
RAV1
M02649_2.00
Arabidopsis thaliana
VNSCAACAKWDN

NHWMTGTTGSNB
SELEX
Mathelier et al.(2014)
MA0582.1
0.860 0.860
RAV1
M02650_2.00
Arabidopsis thaliana
NHCWCCTGRNNH

DNNYCAGGWGDN
SELEX
Mathelier et al.(2014)
MA0583.1
0.860 0.860
RAV1
M09748_2.00
Arabidopsis thaliana
VNSCAACAKWDN

NHWMTGTTGSNB
Transfac
Matys et al.(2006)
P$RAV1_01
0.860 0.860
RAV1
M09749_2.00
Arabidopsis thaliana
NHCWCCTGRNNH

DNNYCAGGWGDN
Transfac
Matys et al.(2006)
P$RAV1_02
0.860 0.860
ARF14
M01648_2.00
Arabidopsis thaliana
RCAACAKA

TMTGTTGY
PBM
Weirauch et al.(2014)
pTH8727
0.787 0.787
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.1001s0020.1.p AP2 69 118
SapurV1A.1001s0020.1.p B3 189 294

Links

Other AP2,B3 family TFs
Other Salix purpurea TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29738.m001050 Ricinus communis 29738.m001050 I 0.907
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.820
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.847
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.847
ARF14 Arabidopsis thaliana AT3G25730 D 0.787
BGIOSGA000982 Oryza indica BGIOSGA000982 I 0.720
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.747
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.733
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.733
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.792
Bo2g061320 Brassica oleracea Bo2g061320 I 0.833
Bo2g138650 Brassica oleracea Bo2g138650 I 0.793
Bo3g138550 Brassica oleracea Bo3g138550 I 0.867
Bo5g015210 Brassica oleracea Bo5g015210 I 0.860
Bo5g043120 Brassica oleracea Bo5g043120 I 0.867
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.787
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.860
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.867
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.847
Bra011002 Brassica rapa Bra011002 I 0.853
Bra019821 Brassica rapa Bra019821 I 0.860
Bra024735 Brassica rapa Bra024735 I 0.872
Bra025159 Brassica rapa Bra025159 I 0.735
Bra026509 Brassica rapa Bra026509 I 0.780
Bra026917 Brassica rapa Bra026917 I 0.853
Bra038346 Brassica rapa Bra038346 I 0.833
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.740
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.740
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.733
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.789
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.867
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.853
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.853
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.820
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.873
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.907
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.940
Ca_08436 Cicer arietinum Ca_08436 I 0.847
Ca_24123 Cicer arietinum Ca_24123 I 0.887
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.769
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.893
Cla000872 Citrullus lanatus Cla000872 I 0.805
Cla020675 Citrullus lanatus Cla020675 I 0.853
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.818
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.853
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.805
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.827
Eucgr.D00053 Eucalyptus grandis Eucgr.D00053 I 0.733
Eucgr.L01673 Eucalyptus grandis Eucgr.L01673 I 0.720
e_gw1.63.77.1 Physcomitrella patens e_gw1.63.77.1 I 0.753
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.907
gene10330-v1.0-hybrid Fragaria vesca gene10330-v1.0-hybrid N 0.713
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.887
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.913
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.859
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.847
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.867
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.887
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.873
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.805
GRMZM2G159592 Zea mays GRMZM2G159592 I 0.753
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.793
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I 0.760
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.727
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.792
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.799
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.807
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.867
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.773
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I 0.753
GSMUA_AchrUn_randomG06880_001 Musa acuminata GSMUA_AchrUn_randomG06880_001 I 0.700
gw1.135.126.1 Physcomitrella patens gw1.135.126.1 I 0.773
LPERR01G02360 Leersia perrieri LPERR01G02360 I 0.765
LPERR01G02380 Leersia perrieri LPERR01G02380 I 0.740
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.776
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.760
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.772
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.853
MDP0000128924 Malus domestica MDP0000128924 I 0.893
MDP0000153589 Malus domestica MDP0000153589 N 0.707
MDP0000321569 Malus domestica MDP0000321569 N 0.713
MDP0000939633 Malus domestica MDP0000939633 I 0.893
MDP0000945267 Malus domestica MDP0000945267 I 0.740
mgf019592m Mimulus guttatus mgf019592m I 0.880
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.752
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.725
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.747
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.720
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.752
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.867
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.873
OB01G12600 Oryza brachyantha OB01G12600 I 0.777
OBART01G02610 Oryza barthii OBART01G02610 I 0.747
OBART01G27360 Oryza barthii OBART01G27360 I 0.781
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.747
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.760
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.800
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.747
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.733
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.781
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.800
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.747
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.733
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.781
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.792
OPUNC01G02240 Oryza punctata OPUNC01G02240 I 0.767
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.781
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.800
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.893
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.747
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.747
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.740
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.781
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.747
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.733
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.781
OS01G0140700 Oryza sativa OS01G0140700 I 0.747
OS01G0141000 Oryza sativa OS01G0141000 I 0.733
OS01G0693400 Oryza sativa OS01G0693400 I 0.781
OS05G0549800 Oryza sativa OS05G0549800 I 0.793
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I 0.738
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.815
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.777
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.753
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I 0.718
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.779
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.753
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.762
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.815
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.767
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.880
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I 0.760
PK15652.1 Cannabis sativa PK15652.1 I 0.893
Pm015500 Prunus mume Pm015500 I 0.760
Pm029015 Prunus mume Pm029015 I 0.900
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.927
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.973
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.900
PRUPE_ppa026046mg Prunus persica PRUPE_ppa026046mg I 0.747
RAV1 Arabidopsis thaliana AT1G13260 D 0.860
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.867
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.873
RAV2 Arabidopsis thaliana AT1G68840 D 0.867
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.927
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 1.000
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.765
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.760
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.805
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.776
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.776
Si001909m.g Setaria italica Si001909m.g I 0.753
Si004045m.g Setaria italica Si004045m.g I 0.757
Si024576m.g Setaria italica Si024576m.g I 0.793
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.799
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.880
TCM_011862 Theobroma cacao TCM_011862 I 0.893
TCM_019508 Theobroma cacao TCM_019508 I 0.760
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.880
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.807
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.860
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.867
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.873
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.747
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.755
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.740
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.707
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.740
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.752
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.740
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.740
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.745
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.753
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.873
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I 0.787