CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
orange1.1g015846m.g
(
Citrus sinensis
)
AP2,BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02892 (zf-BED)
IPR001471
IPR003656
orange1.1g015846m.g
T010649_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g015846m
BED ZF
16
63
SKVWDEFTKYKGEDGTDWAICSLCKKEFDGSSKKGTTHLKNHLDRCRA
orange1.1g015846m
BED ZF
134
181
SKVWDVFTKYKGEDGMDWAKCSICEKEFDGSSKKGTTHLKNHLQRCRA
orange1.1g015846m
AP2
320
373
RRYRGVRLRPRGKYGAEIRDQFGGGGARIWLGTFETAEDAALAYDRAAYRMRGP
Links
Other
AP2,BED ZF
family TFs
Other
Citrus sinensis
TFs
0 Related TFs
">No related TF found