CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene29787-v1.0-hybrid
(
Fragaria vesca
)
AP2,LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF03195 (DUF260)
IPR001471
IPR004883
gene29787-v1.0-hybrid
T010659_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna29787.1-v1.0-hybrid
LOB
17
115
ACAACRHQRKRCEEDCVMAPYFTADKEEEFKAVHKLFGVSNMSKLLKQLEDQNHRTQAVASFVWEAYMWKQDPIAGPRGRYKALEEECVYLKSLLKSNR
mrna29787.1-v1.0-hybrid
AP2
414
466
KHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFNTAEEAALAYDQAAFRMRGT
Links
Other
AP2,LOB
family TFs
Other
Fragaria vesca
TFs
0 Related TFs
">No related TF found