tfap2c (Oryzias latipes)
AP-2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03299 (TF_AP-2) IPR013854 ENSORLG00000006158 T010947_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tfap2a
M00111_2.00
Mus musculus
HSCCBNVRGS

SCYBNVGGSD
PBM
Badis et al.(2009)
Tcfap2a_2337
0.759 0.759
TFAP2A
M02762_2.00
Homo sapiens
HGCCYBVRGGSD

HSCCYBVRGGCD
SELEX
Jolma et al.(2013)
TFAP2A_1
0.759 0.759
TFAP2A
M02763_2.00
Homo sapiens
HGCCYSMGGCN

NGCCKSRGGCD
SELEX
Jolma et al.(2013)
TFAP2A_2
0.759 0.759
TFAP2A
M02764_2.00
Homo sapiens
NSCCCBNVRGGSN

NSCCYBNVGGGSN
SELEX
Jolma et al.(2013)
TFAP2A_3
0.759 0.759
TFAP2A
M02765_2.00
Homo sapiens
HGCCTSRGGCD

HGCCYSAGGCD
SELEX
Jolma et al.(2013)
TFAP2A_4
0.759 0.759
TFAP2A
M02766_2.00
Homo sapiens
HGCCYBVRGGCD

HGCCYBVRGGCD
SELEX
Jolma et al.(2013)
TFAP2A_5
0.759 0.759
TFAP2A
M02767_2.00
Homo sapiens
WGCCCYNVGGGCD

HGCCCBNRGGGCW
SELEX
Jolma et al.(2013)
TFAP2A_6
0.759 0.759
Tfap2a
M02768_2.00
Mus musculus
HGCCYBVRGGCR

YGCCYBVRGGCD
SELEX
Jolma et al.(2013)
Tcfap2a_1
0.759 0.759
Tfap2a
M02769_2.00
Mus musculus
HGCCTSRGGCD

HGCCYSAGGCD
SELEX
Jolma et al.(2013)
Tcfap2a_2
0.759 0.759
Tfap2a
M02770_2.00
Mus musculus
WGCCCYBVGGGCD

HGCCCBVRGGGCW
SELEX
Jolma et al.(2013)
Tcfap2a_3
0.759 0.759
TFAP2A
M04054_2.00
Homo sapiens
NGCCBSVGGCN

NGCCBSVGGCN
SELEX
Yin et al.(2017)
TFAP2A_FL_HT-SELEX
0.759 0.759
TFAP2A
M07784_2.00
Homo sapiens
NBNSCCYSRGGSCWN

NWGSCCYSRGGSNVN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_AP2ALPHA_UCD
0.759 0.759
TFAP2A
M08703_2.00
Homo sapiens
NHDSCCYCAGGSHWN

NWDSCCTGRGGSHDN
Misc
Kulakovskiy et al.(2013)
AP2A_HUMAN.H11MO.0.A
0.759 0.759
Tfap2a
M08704_2.00
Mus musculus
SCCYCRGGSNNN

NNNSCCYGRGGS
Misc
Kulakovskiy et al.(2013)
AP2A_MOUSE.H11MO.0.A
0.759 0.759
TFAP2A
M09755_2.00
Homo sapiens
GCCBBVVGS

SCBBVVGGC
Transfac
Matys et al.(2006)
V$AP2ALPHA_01
0.759 0.759
TFAP2A
M09756_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2ALPHA_02
0.759 0.759
TFAP2A
M09757_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2ALPHA_03
0.759 0.759
TFAP2A
M09758_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2ALPHA_Q4
0.759 0.759
TFAP2A
M09759_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2ALPHA_Q6
0.759 0.759
TFAP2A
M09760_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFAP2A_09
0.759 0.759
TFAP2A
M04055_2.00
Homo sapiens
NSCCTNAGGSN

NSCCTNAGGSN
SELEX
Yin et al.(2017)
TFAP2A_FL_Methyl-HT-SELEX
0.759 0.759
Tfap2b
M00112_2.00
Mus musculus
CCBSRGGSNW

WNSCCYSVGG
PBM
Badis et al.(2009)
Tcfap2b_3988
0.730 0.730
TFAP2B
M02753_2.00
Homo sapiens
HSCCYBVRGGCD

HGCCYBVRGGSD
SELEX
Jolma et al.(2013)
TFAP2B_1
0.730 0.730
TFAP2B
M02754_2.00
Homo sapiens
HGCCTSRGGCD

HGCCYSAGGCD
SELEX
Jolma et al.(2013)
TFAP2B_2
0.730 0.730
TFAP2B
M02755_2.00
Homo sapiens
WGCCCYBVRGGCD

HGCCYBVRGGGCW
SELEX
Jolma et al.(2013)
TFAP2B_3
0.730 0.730
TFAP2B
M04046_2.00
Homo sapiens
NSCCBNVGGSN

NSCCBNVGGSN
SELEX
Yin et al.(2017)
TFAP2B_eDBD_HT-SELEX
0.730 0.730
TFAP2E
M04050_2.00
Homo sapiens
HSCCYSRGGSD

HSCCYSRGGSD
SELEX
Yin et al.(2017)
TFAP2E_FL_HT-SELEX_1
0.730 0.730
TFAP2E
M04051_2.00
Homo sapiens
NSCCBBVGGSCA

TGSCCBVVGGSN
SELEX
Yin et al.(2017)
TFAP2E_FL_HT-SELEX_2
0.730 0.730
TFAP2B
M08701_2.00
Homo sapiens
GSCYGVGGRV

BYCCBCRGSC
Misc
Kulakovskiy et al.(2013)
AP2B_HUMAN.H11MO.0.B
0.730 0.730
Tfap2b
M08705_2.00
Mus musculus
GSCYGVGGRV

BYCCBCRGSC
Misc
Kulakovskiy et al.(2013)
AP2B_MOUSE.H11MO.0.B
0.730 0.730
TFAP2B
M09750_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2BETA_Q3
0.730 0.730
TFAP2B
M04047_2.00
Homo sapiens
NSCCYNRGGSD

HSCCYNRGGSN
SELEX
Yin et al.(2017)
TFAP2B_eDBD_Methyl-HT-SELEX
0.730 0.730
TFAP2E
M04052_2.00
Homo sapiens
HSCCYSRGGSD

HSCCYSRGGSD
SELEX
Yin et al.(2017)
TFAP2E_FL_Methyl-HT-SELEX_1
0.730 0.730
TFAP2E
M04053_2.00
Homo sapiens
NSCCYNRGGGCR

YGCCCYNRGGSN
SELEX
Yin et al.(2017)
TFAP2E_FL_Methyl-HT-SELEX_2
0.730 0.730
Tfap2e
M00114_2.00
Mus musculus
NNGCCYBVGG

CCBVRGGCNN
PBM
Badis et al.(2009)
Tcfap2e_3713
0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000007748 AP-2 242 419

Links

Other AP-2 family TFs
Other Oryzias latipes TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAPLG00000003702 Anas platyrhynchos ENSAPLG00000003702 I 0.895
ENSXMAG00000005803 Xiphophorus maculatus ENSXMAG00000005803 I 0.874
ENSPFOG00000016070 Poecilia formosa ENSPFOG00000016070 I 0.874
ENSONIG00000006816 Oreochromis niloticus ENSONIG00000006816 I 0.868
tfap2c Gasterosteus aculeatus ENSGACG00000005944 I 0.862
ENSGMOG00000013321 Gadus morhua ENSGMOG00000013321 I 0.862
tfap2c Takifugu rubripes ENSTRUG00000013876 I 0.856
tfap2c Tetraodon nigroviridis ENSTNIG00000003840 I 0.856
ENSLOCG00000006963 Lepisosteus oculatus ENSLOCG00000006963 I 0.839
ENSMMUP00000008137 Macaca fascicularis ENSMMUP00000008137 I 0.814
Alligator_sinensis_CCG001733.1 Alligator sinensis Alligator_sinensis_CCG001733.1 I 0.793
Cmyd_10017480 Chelonia mydas Cmyd_10017480 I 0.793
TFAP2C Ornithorhynchus anatinus ENSOANG00000009253 I 0.793
ENSPSIG00000010979 Pelodiscus sinensis ENSPSIG00000010979 I 0.787
Pvit_11594 Pogona vitticeps Pvit_11594 I 0.787
TFAP2C Monodelphis domestica ENSMODG00000016445 I 0.782
ENSSHAG00000011591 Sarcophilus harrisii ENSSHAG00000011591 I 0.782
ENSLACG00000016799 Latimeria chalumnae ENSLACG00000016799 I 0.782
TFAP2C Anolis carolinensis ENSACAG00000016089 I 0.782
Ogr07365 Ophisaurus gracilis Ogr07365 I 0.782
ENSAMEG00000002558 Ailuropoda melanoleuca ENSAMEG00000002558 I 0.764
tfap2c.S Xenopus laevis XB-GENE-865803 I 0.764
ENSBTAP00000001651-D1 Bos grunniens ENSBTAP00000001651-D1 I 0.764
ENSLOCG00000013190 Lepisosteus oculatus ENSLOCG00000013190 I 0.764
tfap2a Danio rerio ENSDARG00000059279 I 0.764
TFAP2A Loxodonta africana ENSLAFG00000011386 I 0.759
TFAP2A Gorilla gorilla ENSGGOG00000007542 I 0.759
tfap2a Xenopus tropicalis XB-GENE-481201 I 0.759
ENSSTOG00000019865 Ictidomys tridecemlineatus ENSSTOG00000019865 I 0.759
ENSGMOG00000000705 Gadus morhua ENSGMOG00000000705 I 0.759
ENSMICG00000005131 Microcebus murinus ENSMICG00000005131 I 0.759
ENSLOCG00000016338 Lepisosteus oculatus ENSLOCG00000016338 I 0.759
ENSPANG00000022354 Papio anubis ENSPANG00000022354 I 0.759
TFAP2A Macaca mulatta ENSMMUG00000006186 I 0.759
TFAP2A Oryctolagus cuniculus ENSOCUG00000005315 I 0.759
ENSOARG00000016395 Ovis aries ENSOARG00000016395 I 0.759
ENSPPYG00000016218 Pongo abelii ENSPPYG00000016218 I 0.759
TFAP2A Otolemur garnettii ENSOGAG00000003629 I 0.759
TFAP2A Ochotona princeps ENSOPRG00000014292 I 0.759
ENSACAG00000008801 Anolis carolinensis ENSACAG00000008801 I 0.759
TFAP2A Ornithorhynchus anatinus ENSOANG00000007183 I 0.759
TFAP2A Pan troglodytes ENSPTRG00000017714 I 0.759
tfap2a.S Xenopus laevis XB-GENE-865453 I 0.759
ENSSHAG00000004162 Sarcophilus harrisii ENSSHAG00000004162 I 0.759
TFAP2A Monodelphis domestica ENSMODG00000010299 I 0.759
Tfap2a Rattus norvegicus ENSRNOG00000015522 I 0.759
Tfap2a Mus musculus ENSMUSG00000021359 D 0.759
ENSMPUG00000000601 Mustela putorius furo ENSMPUG00000000601 I 0.759
TFAP2A Myotis lucifugus ENSMLUG00000011477 I 0.759
ENSLACG00000003315 Latimeria chalumnae ENSLACG00000003315 I 0.759
TFAP2A Canis familiaris ENSCAFG00000009658 I 0.759
TFAP2A Echinops telfairi ENSETEG00000017102 I 0.759
Myotis_brandtii_Tfap2a_10010543 Myotis brandtii Myotis_brandtii_Tfap2a_10010543 I 0.759
ENSCSAG00000007447 Chlorocebus sabaeus ENSCSAG00000007447 I 0.759
AAH59962 Xenopus laevis AAH59962 I 0.759
TFAP2A Equus caballus ENSECAG00000017468 I 0.759
TFAP2A Cavia porcellus ENSCPOG00000000121 I 0.759
tfap2c Danio rerio ENSDARG00000040606 I 0.759
Gfo_R006498 Geospiza fortis Gfo_R006498 I 0.759
TFAP2A Gallus gallus ENSGALG00000012775 I 0.759
TFAP2A Callithrix jacchus ENSCJAG00000021312 I 0.759
TFAP2A Dasypus novemcinctus ENSDNOG00000045908 I 0.759
ENSFALG00000013306 Ficedula albicollis ENSFALG00000013306 I 0.759
Pvit_11230 Pogona vitticeps Pvit_11230 I 0.759
ENSTSYG00000003193 Tarsius syrichta ENSTSYG00000003193 I 0.759
TFAP2A Bos taurus ENSBTAG00000001250 I 0.759
TFAP2A Homo sapiens ENSG00000137203 D 0.759
tfap2a Oryzias latipes ENSORLG00000006633 I 0.753
tfap2a Gasterosteus aculeatus ENSGACG00000002334 I 0.753
ENSPSIG00000005093 Pelodiscus sinensis ENSPSIG00000005093 I 0.753
ENSNLEG00000000503 Nomascus leucogenys ENSNLEG00000000503 I 0.753
ENSPMAG00000002994 Petromyzon marinus ENSPMAG00000002994 I 0.753
ENSXMAG00000012878 Xiphophorus maculatus ENSXMAG00000012878 I 0.747
TFAP2A Felis catus ENSFCAG00000012318 I 0.747
ENSTGUG00000005713 Taeniopygia guttata ENSTGUG00000005713 I 0.747
ENSLACG00000009501 Latimeria chalumnae ENSLACG00000009501 I 0.747
TFAP2A Sus scrofa ENSSSCG00000001036 I 0.747
tfap2b Danio rerio ENSDARG00000012667 I 0.741
tfap2a Tetraodon nigroviridis ENSTNIG00000005737 I 0.741
TFAP2B Anolis carolinensis ENSACAG00000005251 I 0.736
TFAP2A Pteropus vampyrus ENSPVAG00000000240 I 0.736
ENSGMOG00000017800 Gadus morhua ENSGMOG00000017800 I 0.736
TFAP2E Cavia porcellus ENSCPOG00000024445 I 0.736
Pvit_00888 Pogona vitticeps Pvit_00888 I 0.736
TFAP2E Loxodonta africana ENSLAFG00000029444 I 0.736
ENSPPYG00000001556 Pongo abelii ENSPPYG00000001556 I 0.730
tfap2b.L Xenopus laevis XB-GENE-1188127 I 0.730
ENSPANG00000026000 Papio anubis ENSPANG00000026000 I 0.730
Myotis_brandtii_TFAP2B_10011888 Myotis brandtii Myotis_brandtii_TFAP2B_10011888 I 0.730
ENSPPYG00000016700 Pongo abelii ENSPPYG00000016700 I 0.730
Gfo_R000728 Geospiza fortis Gfo_R000728 I 0.730
Brh_R009982 Buceros rhinoceros Brh_R009982 I 0.730
ENSSTOG00000025602 Ictidomys tridecemlineatus ENSSTOG00000025602 I 0.730
Cmyd_10020449 Chelonia mydas Cmyd_10020449 I 0.730
Alligator_sinensis_CCG010010.1 Alligator sinensis Alligator_sinensis_CCG010010.1 I 0.730
Aan_R002198 Calypte anna Aan_R002198 I 0.730
tfap2b Xenopus tropicalis XB-GENE-485026 I 0.730
TFAP2B Taeniopygia guttata ENSTGUG00000013267 I 0.730
ENSSTOG00000001781 Ictidomys tridecemlineatus ENSSTOG00000001781 I 0.730
TFAP2B Sus scrofa ENSSSCG00000025535 I 0.730
TFAP2B Pteropus vampyrus ENSPVAG00000007479 I 0.730
TFAP2B Pan troglodytes ENSPTRG00000018269 I 0.730
Tfap2b Rattus norvegicus ENSRNOG00000011823 I 0.730
ENSP00000263046 Macaca fascicularis ENSP00000263046 I 0.730
ENSSHAG00000012585 Sarcophilus harrisii ENSSHAG00000012585 I 0.730
ENSP00000263046-D1 Bos grunniens ENSP00000263046-D1 I 0.730
ENSPSIG00000008002 Pelodiscus sinensis ENSPSIG00000008002 I 0.730
ENSOARG00000012828 Ovis aries ENSOARG00000012828 I 0.730
TFAP2B Cavia porcellus ENSCPOG00000022967 I 0.730
TFAP2B Gorilla gorilla ENSGGOG00000014613 I 0.730
TFAP2E Gorilla gorilla ENSGGOG00000009762 I 0.730
TFAP2B Gallus gallus ENSGALG00000016680 I 0.730
TFAP2B Callithrix jacchus ENSCJAG00000011561 I 0.730
TFAP2B Loxodonta africana ENSLAFG00000027209 I 0.730
ENSMGAG00000014245 Meleagris gallopavo ENSMGAG00000014245 I 0.730
TFAP2B Bos taurus ENSBTAG00000020426 I 0.730
TFAP2B Canis familiaris ENSCAFG00000002156 I 0.730
TFAP2E Callithrix jacchus ENSCJAG00000001531 I 0.730
ENSCSAG00000001086 Chlorocebus sabaeus ENSCSAG00000001086 I 0.730
ENSCSAG00000012975 Chlorocebus sabaeus ENSCSAG00000012975 I 0.730
TFAP2B Homo sapiens ENSG00000008196 D 0.730
TFAP2B Felis catus ENSFCAG00000015482 I 0.730
TFAP2B Equus caballus ENSECAG00000015046 I 0.730
ENSETEG00000019509 Echinops telfairi ENSETEG00000019509 I 0.730
TFAP2E Equus caballus ENSECAG00000003027 I 0.730
TFAP2B Dasypus novemcinctus ENSDNOG00000041262 I 0.730
tfap2b Gasterosteus aculeatus ENSGACG00000007277 I 0.730
TFAP2E Homo sapiens ENSG00000116819 D 0.730
TFAP2E Dasypus novemcinctus ENSDNOG00000036871 I 0.730
ENSFALG00000012772 Ficedula albicollis ENSFALG00000012772 I 0.730
TFAP2B Microcebus murinus ENSMICG00000017317 I 0.730
Tfap2b Mus musculus ENSMUSG00000025927 D 0.730
ENSMPUG00000014894 Mustela putorius furo ENSMPUG00000014894 I 0.730
TFAP2B Ochotona princeps ENSOPRG00000010247 I 0.730
TFAP2B Otolemur garnettii ENSOGAG00000000701 I 0.730
ENSAMEG00000008680 Ailuropoda melanoleuca ENSAMEG00000008680 I 0.730
TFAP2B Oryctolagus cuniculus ENSOCUG00000025542 I 0.730
TFAP2E Ornithorhynchus anatinus ENSOANG00000013427 I 0.730
ENSMPUG00000009084 Mustela putorius furo ENSMPUG00000009084 I 0.730
TFAP2B Myotis lucifugus ENSMLUG00000016209 I 0.730
TFAP2B Ornithorhynchus anatinus ENSOANG00000003130 I 0.730
ENSAMEG00000000718 Ailuropoda melanoleuca ENSAMEG00000000718 I 0.730
TFAP2B Macaca mulatta ENSMMUG00000002869 I 0.730
ENSAPLG00000013905 Anas platyrhynchos ENSAPLG00000013905 I 0.730
TFAP2B Monodelphis domestica ENSMODG00000018831 I 0.730
tfap2e Xenopus tropicalis XB-GENE-876803 I 0.724
ENSPFOG00000015812 Poecilia formosa ENSPFOG00000015812 I 0.724
tfap2e.L Xenopus laevis XB-GENE-876809 I 0.724
TFAP2E Ochotona princeps ENSOPRG00000012238 I 0.724
tfap2b Tetraodon nigroviridis ENSTNIG00000014239 I 0.724
Tfap2e Mus musculus ENSMUSG00000042477 D 0.724
ENSSHAG00000016887 Sarcophilus harrisii ENSSHAG00000016887 I 0.724
ENSXMAG00000006217 Xiphophorus maculatus ENSXMAG00000006217 I 0.724
TFAP2E Pan troglodytes ENSPTRG00000000523 I 0.724
ENSMLUG00000009852 Myotis lucifugus ENSMLUG00000009852 I 0.724
ENSNLEG00000003972 Nomascus leucogenys ENSNLEG00000003972 I 0.724
Myotis_brandtii_Tcfap2e_10028879 Myotis brandtii Myotis_brandtii_Tcfap2e_10028879 I 0.724
ENSAPLG00000010002 Anas platyrhynchos ENSAPLG00000010002 I 0.718
yakG031910 Bos grunniens yakG031910 I 0.718
ENSGALG00000002393 Gallus gallus ENSGALG00000002393 I 0.718
ENSPSIG00000011168 Pelodiscus sinensis ENSPSIG00000011168 I 0.718
TFAP2E Pteropus vampyrus ENSPVAG00000001869 I 0.718
ENSLACG00000015883 Latimeria chalumnae ENSLACG00000015883 I 0.718
ENSMGAG00000004014 Meleagris gallopavo ENSMGAG00000004014 I 0.718
Afo_R013926 Aptenodytes forsteri Afo_R013926 I 0.718
ENSOARG00000019518 Ovis aries ENSOARG00000019518 I 0.718
Brh_R005153 Buceros rhinoceros Brh_R005153 I 0.718
ENSORLG00000017695 Oryzias latipes ENSORLG00000017695 I 0.718
Alligator_sinensis_CCG014924.1 Alligator sinensis Alligator_sinensis_CCG014924.1 I 0.718
ENSFALG00000000745 Ficedula albicollis ENSFALG00000000745 I 0.713
TFAP2E Taeniopygia guttata ENSTGUG00000001672 I 0.713
TFAP2E Bos taurus ENSBTAG00000001959 I 0.713
TFAP2E Tursiops truncatus ENSTTRG00000007258 I 0.713
Aan_R015525 Calypte anna Aan_R015525 I 0.713
Gfo_R008463 Geospiza fortis Gfo_R008463 I 0.713
TFAP2E Oryctolagus cuniculus ENSOCUG00000013190 I 0.713
Tal_R004483 Tyto alba Tal_R004483 I 0.708
TFAP2C Taeniopygia guttata ENSTGUG00000008378 I 0.708
TFAP2C Meleagris gallopavo ENSMGAG00000009195 I 0.708
Aan_R015804 Calypte anna Aan_R015804 I 0.708
ENSFALG00000010856 Ficedula albicollis ENSFALG00000010856 I 0.708
TFAP2C Gallus gallus ENSGALG00000007690 I 0.708
Gfo_R009571 Geospiza fortis Gfo_R009571 I 0.708
Brh_R009798 Buceros rhinoceros Brh_R009798 I 0.708
tfap2c Xenopus tropicalis XB-GENE-488671 I 0.703
ENSMGAG00000016768 Meleagris gallopavo ENSMGAG00000016768 I 0.701
ENSPANG00000004801 Papio anubis ENSPANG00000004801 I 0.701
ENSMPUG00000006387 Mustela putorius furo ENSMPUG00000006387 I 0.701
ENSACAG00000017357 Anolis carolinensis ENSACAG00000017357 I 0.701