CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10022982m.g
(
Capsella rubella
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
Carubv10022982m.g
T011227_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10022982m
AP-2
145
275
GHVMLKKLRDALETVRGRMDGRNREEVEKAISMVEALAVKLTQNEGELIQDKFEVKKLASFLKKASEDAKKLVNQEKSFACAEIDSARALVMRLGGTFQEQELCSKASRDQGPNVEKLVEEVQEARRIKQM
Carubv10023028m
AP-2
126
256
GHVMLKKLRDALETVRGRMDGRNREEVEKAISMVEALAVKLTQNEGELIQDKFEVKKLASFLKKASEDAKKLVNQEKSFACAEIDSARALVMRLGGTFQEQELCSKASRDQGPNVEKLVEEVQEARRIKQM
Links
Other
AP-2
family TFs
Other
Capsella rubella
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1642s0049
Capsella grandiflora
Cagra.1642s0049
N
1.000
Bostr.9345s0049
Boechera stricta
Bostr.9345s0049
N
0.790
fgenesh2_kg.4__2202__AT2G40820.1
Arabidopsis lyrata
fgenesh2_kg.4__2202__AT2G40820.1
N
0.706
Thhalv10016526m.g
Eutrema salsugineum
Thhalv10016526m.g
N
0.702