GPUH_0002219901 (Gongylonema pulchrum)
AP-2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03299 (TF_AP-2) IPR013854 GPUH_0002219901 T011398_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AP-2
M03584_2.00
Drosophila melanogaster
HGCCYSRGGCD

HGCCYSRGGCD
SELEX
Nitta et al.(2015)
AP-2_1
0.708 0.708
AP-2
M03585_2.00
Drosophila melanogaster
HGCCYBVRGGCD

HGCCYBVRGGCD
SELEX
Nitta et al.(2015)
AP-2_2
0.708 0.708
AP-2
M03586_2.00
Drosophila melanogaster
NSCCYBNVRGGCN

NGCCYBNVRGGSN
SELEX
Nitta et al.(2015)
AP-2_3
0.708 0.708
AP-2
M03587_2.00
Drosophila melanogaster
HGCCYNRGGCD

HGCCYNRGGCD
SELEX
Nitta et al.(2015)
AP-2_4
0.708 0.708
AP-2
M03588_2.00
Drosophila melanogaster
HSCCYBVRGGSD

HSCCYBVRGGSD
SELEX
Nitta et al.(2015)
AP-2_5
0.708 0.708
AP-2
M03589_2.00
Drosophila melanogaster
HGCCYBNVRGGCD

HGCCYBNVRGGCD
SELEX
Nitta et al.(2015)
AP-2_6
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPUH_0002219901-mRNA-1 AP-2 74 164

Links

Other AP-2 family TFs
Other Gongylonema pulchrum TFs

Invalid Input OrderBy

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action