CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g41867
(
Romanomermis culicivorax
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
nRc.2.0.1.g41867
T011487_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t41867-RA
AP-2
7
209
DIFCSVPGRLSLLSSSAKYKVTVGEIQRRLNPPECLNASLLGGILRRAKSKNGGKSLRESLEKIGLSLPAGRRKAANVNLLTSLVEAESLNLARDFGTVCQHEFPARHCAEYICRLHYTGDSADVQRRKENLMITKQTLKELLDLLSQDRSPLCNSREPPILDRSIQQYLNNFSLTTHGFGSAAILGAMNAVNNWLVESIKFL
Links
Other
AP-2
family TFs
Other
Romanomermis culicivorax
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
D918_05204
Trichuris suis
D918_05204
I
0.933
TTRE_0000281201
Trichuris trichiura
TTRE_0000281201
I
0.933
D917_08051
Trichinella nativa
D917_08051
I
0.919
ENSETEG00000009017
Echinops telfairi
ENSETEG00000009017
I
0.893
ENSPCAG00000015999
Procavia capensis
ENSPCAG00000015999
I
0.893
ENSGMOG00000009513
Gadus morhua
ENSGMOG00000009513
I
0.886
ENSGACG00000002672
Gasterosteus aculeatus
ENSGACG00000002672
I
0.886
tfap2b
Danio rerio
ENSDARG00000012667
I
0.886
ENSFCAG00000013878
Felis catus
ENSFCAG00000013878
I
0.870
ENSSARG00000001996
Sorex araneus
ENSSARG00000001996
I
0.864
ENSMEUG00000007703
Macropus eugenii
ENSMEUG00000007703
I
0.857
scaffold16-EXSNAP2012.142
Pristionchus exspectatus
scaffold16-EXSNAP2012.142
I
0.840
PEQ_0000626601
Parascaris equorum
PEQ_0000626601
I
0.840
nOo.2.0.1.g09186
Onchocerca ochengi
nOo.2.0.1.g09186
I
0.833
SSLN_0000471801
Schistocephalus solidus
SSLN_0000471801
I
0.826
MCINX002204
Melitaea cinxia
MCINX002204
I
0.825
TFAP2A
Homo sapiens
ENSG00000137203
D
0.820
ACEP15405
Atta cephalotes
ACEP15405
I
0.820
ANCCEY_07283
Ancylostoma ceylanicum
ANCCEY_07283
I
0.818
D915_00208
Fasciola hepatica
D915_00208
I
0.814
EmuJ_000457200
Echinococcus multilocularis
EmuJ_000457200
I
0.812
PPA19579
Pristionchus pacificus
PPA19579
I
0.808
GPLIN_001548200
Globodera pallida
GPLIN_001548200
I
0.807
Hba_07416
Heterorhabditis bacteriophora
Hba_07416
I
0.802
EVEC_0000221401
Enterobius vermicularis
EVEC_0000221401
I
0.800
SMTD_0001395301
Schistosoma mattheei
SMTD_0001395301
I
0.798
Sakowv30010957m.g
Saccoglossus kowalevskii
Sakowv30010957m.g
I
0.798
TsM_000500400
Taenia solium
TsM_000500400
I
0.797
nAv.1.0.1.g06665
Acanthocheilonema viteae
nAv.1.0.1.g06665
I
0.795
ECPE_0000534101
Echinostoma caproni
ECPE_0000534101
I
0.795
TFAP2D
Microcebus murinus
ENSMICG00000005507
I
0.794
TELCIR_24906
Teladorsagia circumcincta
TELCIR_24906
I
0.786
Hsal_09862--XP_394369.3_APIME
Harpegnathos saltator
Hsal_09862--XP_394369.3_APIME
I
0.776
MhA1_Contig1235.frz3.gene9
Meloidogyne hapla
MhA1_Contig1235.frz3.gene9
I
0.765
genemark-nMf.1.1.scaf12791-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf12791-processed-gene-0.1
I
0.765
SMAR004261
Strigamia maritima
SMAR004261
I
0.763
CLEC012897
Cimex lectularius
CLEC012897
I
0.760
ALUE_0002350801
Ascaris lumbricoides
ALUE_0002350801
I
0.750
SPER_0000909201
Spirometra erinaceieuropaei
SPER_0000909201
I
0.745
OFLC_0000811001
Onchocerca flexuosa
OFLC_0000811001
I
0.741
TFAP2B
Sorex araneus
ENSSARG00000005232
I
0.740
TFAP2B
Erinaceus europaeus
ENSEEUG00000014925
I
0.740
EFV53100
Trichinella spiralis
EFV53100
I
0.733
TMUE_s0029003400
Trichuris muris
TMUE_s0029003400
I
0.728
tfap2b
Tetraodon nigroviridis
ENSTNIG00000014240
I
0.727
TFAP2A
Tursiops truncatus
ENSTTRG00000012832
I
0.725
Sjc_0121700
Schistosoma japonicum
Sjc_0121700
I
0.723
D917_06384
Trichinella nativa
D917_06384
I
0.723
ENSVPAG00000012139
Vicugna pacos
ENSVPAG00000012139
I
0.721
Myotis_brandtii_TFAP2C_10018204
Myotis brandtii
Myotis_brandtii_TFAP2C_10018204
I
0.719
TFAP2A
Erinaceus europaeus
ENSEEUG00000002713
I
0.718
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2
I
0.714
GPUH_0002219901
Gongylonema pulchrum
GPUH_0002219901
I
0.708
EFV52717
Trichinella spiralis
EFV52717
I
0.707
tetur36g00810
Tetranychus urticae
tetur36g00810
I
0.703