CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0001226700
(
Parastrongyloides trichosuri
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
PTRK_0001226700
T011507_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0001226700.1
AP-2
279
480
EIFCTVPGRTSLLSSTTKYRVTIAEITRRINPPECLNASLLGGILRKAKSKDGGKMLRESLRRINLILPAGRRKAAQVTAFTSLVEEEALHMAHDFSKLCDKEFPAKVIGQEIVNHELNTNADYERMRTILSYSRIGLKLVCELLNKDKAPITSLSEPILLDPTIQRPLTHFSMLTHGFGSLALLGSFNALNNIFTEASKHL
Links
Other
AP-2
family TFs
Other
Parastrongyloides trichosuri
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SSTP_0000151700
Strongyloides stercoralis
SSTP_0000151700
N
0.934
SVE_0188400
Strongyloides venezuelensis
SVE_0188400
N
0.929
SPAL_0000913700
Strongyloides papillosus
SPAL_0000913700
N
0.929
ANCCEY_07283
Ancylostoma ceylanicum
ANCCEY_07283
I
0.886
GPLIN_001548200
Globodera pallida
GPLIN_001548200
I
0.877
MhA1_Contig1235.frz3.gene9
Meloidogyne hapla
MhA1_Contig1235.frz3.gene9
I
0.827
genemark-nMf.1.1.scaf12791-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf12791-processed-gene-0.1
I
0.827
TELCIR_24906
Teladorsagia circumcincta
TELCIR_24906
I
0.821
GPUH_0002219901
Gongylonema pulchrum
GPUH_0002219901
I
0.798
TTRE_0000281201
Trichuris trichiura
TTRE_0000281201
I
0.778
D918_05204
Trichuris suis
D918_05204
I
0.778
ENSSARG00000001996
Sorex araneus
ENSSARG00000001996
I
0.773
D917_08051
Trichinella nativa
D917_08051
I
0.756
ENSGMOG00000009513
Gadus morhua
ENSGMOG00000009513
I
0.750
ENSGACG00000002672
Gasterosteus aculeatus
ENSGACG00000002672
I
0.750
tfap2b
Danio rerio
ENSDARG00000012667
I
0.750
TFAP2D
Microcebus murinus
ENSMICG00000005507
I
0.746
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2
I
0.738
ENSETEG00000009017
Echinops telfairi
ENSETEG00000009017
I
0.726
ENSMEUG00000007703
Macropus eugenii
ENSMEUG00000007703
I
0.726
ENSPCAG00000015999
Procavia capensis
ENSPCAG00000015999
I
0.726
ASIM_0000382801
Anisakis simplex
ASIM_0000382801
N
0.726
D915_00208
Fasciola hepatica
D915_00208
I
0.721
SMTD_0001395301
Schistosoma mattheei
SMTD_0001395301
I
0.708
ECPE_0000534101
Echinostoma caproni
ECPE_0000534101
I
0.705
nOo.2.0.1.g09186
Onchocerca ochengi
nOo.2.0.1.g09186
I
0.702
MCINX002204
Melitaea cinxia
MCINX002204
I
0.700