CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cob_02496
(
Colletotrichum orbiculare
)
APSES
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04383 (KilA-N)
IPR018004
Cob_02496
T011809_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU07587
M01654_2.00
Neurospora crassa
NNNDCRCGN
NCGYGHNNN
PBM
Weirauch et al.(2014)
pTH9687
0.684
0.699
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00
PBM CONSTRUCTS
NNACGCGW
WCGCGTNN
PBM
Lambert et al.(2019)
pTH9838
0.673
0.627
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH76367
APSES
95
180
AVNGVAVMRRREDSWLNATQILKVAGVEKGRRTKILEKEIQTGEHEKVQGGYGKYQGTWIKFERGVEVCRQYEVEDILRPLLTYDM
Links
Other
APSES
family TFs
Other
Colletotrichum orbiculare
TFs
205 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy