CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SU7_2011
(
Saccharomyces arboricola
)
APSES
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04383 (KilA-N)
IPR018004
SU7_2011
T012363_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PHD1
M00006_2.00
Saccharomyces cerevisiae
GMTGCAKG
CMTGCAKC
PBM
Badis et al.(2008)
PHD1_4559
0.834
0.965
PHD1
M01516_2.00
Saccharomyces cerevisiae
NBMTGCANN
NNTGCAKVN
PBM
Zhu et al.(2009)
Phd1
0.834
0.965
PHD1
M07437_2.00
Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0355.1
0.834
0.965
PHD1
M07547_2.00
Saccharomyces cerevisiae
VCACACCCACACMCCACACMCNNMCVCH
DGBGKNNGKGTGTGGKGTGTGGGTGTGB
ChIP-exo
Rhee et al.(2011)
Phd1_1
0.834
0.965
PHD1
M07548_2.00
Saccharomyces cerevisiae
MYGCRC
GYGCRK
ChIP-exo
Rhee et al.(2011)
Phd1_2
0.834
0.965
PHD1
M07549_2.00
Saccharomyces cerevisiae
TAGCCGCCGAR
YTCGGCGGCTA
ChIP-exo
Rhee et al.(2011)
Phd1_3
0.834
0.965
PHD1
M08475_2.00
Saccharomyces cerevisiae
SCNGCRGG
CCYGCNGS
Misc
DeBoer et al.(2011)
YKL043W_393
0.834
0.965
PHD1
M08476_2.00
Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN
Misc
DeBoer et al.(2011)
YKL043W_554
0.834
0.965
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EJS42888
APSES
204
334
QVEANGISVVRRADNNMINGTKLLNVTKMTRGRRDGILRSEKIREVVKIGSMHLKGVWIPFERAYILAQREQILDHLYPLFVKNIESIVDASKPANKKFPPQEPTPNFVKQEPSENKIELSSEIKQKDDEI
Links
Other
APSES
family TFs
Other
Saccharomyces arboricola
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
13647_YKL043W
Saccharomyces paradoxus
13647_YKL043W
I
0.840
PHD1
Saccharomyces cerevisiae
YKL043W
D
0.834
13508_YKL043W
Saccharomyces mikatae
13508_YKL043W
I
0.833
14607_YKL043W
Saccharomyces bayanus
14607_YKL043W
I
0.737
SKUD_205603
Saccharomyces kudriavzevii
SKUD_205603
I
0.726
Scas_Contig625.8
Saccharomyces castellii
Scas_Contig625.8
I
0.717
NCAS_0A04710
Naumovozyma castellii
NCAS_0A04710
I
0.717
JL09_g3139
Pichia kudriavzevii
JL09_g3139
I
0.708
KUCA_T00004103001
Kuraishia capsulata
KUCA_T00004103001
I
0.697
XP_002490663.1
Pichia pastoris
XP_002490663.1
I
0.690
PAS_chr1-4_0530
Komagataella pastoris
PAS_chr1-4_0530
I
0.690
KAFR_0A02120
Kazachstania africana
KAFR_0A02120
I
0.688
KAFR_0B01410
Kazachstania africana
KAFR_0B01410
I
0.686
KLTH0D07876g
Kluyveromyces thermotolerans
KLTH0D07876g
I
0.681
KLTH0D07876g
Lachancea thermotolerans
KLTH0D07876g
I
0.681
HPODL_04965
Ogataea parapolymorpha
HPODL_04965
I
0.672
BN7_6724
Wickerhamomyces ciferrii
BN7_6724
I
0.668
CLUG_02047
Candida lusitaniae
CLUG_02047
I
0.668
CLUG_02047
Clavispora lusitaniae
CLUG_02047
I
0.668
17689_YMR016C
Saccharomyces bayanus
17689_YMR016C
I
0.662
CAGL0L01771g
Candida glabrata
CAGL0L01771g
I
0.662
SKUD_205409
Saccharomyces kudriavzevii
SKUD_205409
I
0.662
KLLA0_F04840g
Kluyveromyces lactis
KLLA0_F04840g
I
0.659
16462_YMR016C
Saccharomyces mikatae
16462_YMR016C
I
0.657