SU7_2011 (Saccharomyces arboricola)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 SU7_2011 T012363_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHD1
M00006_2.00
Saccharomyces cerevisiae
GMTGCAKG

CMTGCAKC
PBM
Badis et al.(2008)
PHD1_4559
0.834 0.965
PHD1
M01516_2.00
Saccharomyces cerevisiae
NBMTGCANN

NNTGCAKVN
PBM
Zhu et al.(2009)
Phd1
0.834 0.965
PHD1
M07437_2.00
Saccharomyces cerevisiae
NSMTGCABNN

NNVTGCAKSN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0355.1
0.834 0.965
PHD1
M07547_2.00
Saccharomyces cerevisiae
VCACACCCACACMCCACACMCNNMCVCH

DGBGKNNGKGTGTGGKGTGTGGGTGTGB
ChIP-exo
Rhee et al.(2011)
Phd1_1
0.834 0.965
PHD1
M07548_2.00
Saccharomyces cerevisiae
MYGCRC

GYGCRK
ChIP-exo
Rhee et al.(2011)
Phd1_2
0.834 0.965
PHD1
M07549_2.00
Saccharomyces cerevisiae
TAGCCGCCGAR

YTCGGCGGCTA
ChIP-exo
Rhee et al.(2011)
Phd1_3
0.834 0.965
PHD1
M08475_2.00
Saccharomyces cerevisiae
SCNGCRGG

CCYGCNGS
Misc
DeBoer et al.(2011)
YKL043W_393
0.834 0.965
PHD1
M08476_2.00
Saccharomyces cerevisiae
NSMTGCABNN

NNVTGCAKSN
Misc
DeBoer et al.(2011)
YKL043W_554
0.834 0.965
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJS42888 APSES 204 334

Links

Other APSES family TFs
Other Saccharomyces arboricola TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I 0.833
13647_YKL043W Saccharomyces paradoxus 13647_YKL043W I 0.840
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I 0.737
16462_YMR016C Saccharomyces mikatae 16462_YMR016C I 0.657
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I 0.662
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I 0.668
CAGL0L01771g Candida glabrata CAGL0L01771g I 0.662
CLUG_02047 Candida lusitaniae CLUG_02047 I 0.668
CLUG_02047 Clavispora lusitaniae CLUG_02047 I 0.668
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I 0.672
JL09_g3139 Pichia kudriavzevii JL09_g3139 I 0.708
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I 0.688
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I 0.686
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.659
KLTH0D07876g Kluyveromyces thermotolerans KLTH0D07876g I 0.681
KLTH0D07876g Lachancea thermotolerans KLTH0D07876g I 0.681
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.697
NCAS_0A04710 Naumovozyma castellii NCAS_0A04710 I 0.717
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I 0.690
PHD1 Saccharomyces cerevisiae YKL043W D 0.834
Scas_Contig625.8 Saccharomyces castellii Scas_Contig625.8 I 0.717
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I 0.662
SKUD_205603 Saccharomyces kudriavzevii SKUD_205603 I 0.726
XP_002490663.1 Pichia pastoris XP_002490663.1 I 0.690