CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YALI0_D01573g
(
Yarrowia lipolytica
)
APSES
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04383 (KilA-N)
IPR018004
YALI0_D01573g
T012460_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
stuA
M01649_2.00
Aspergillus nidulans
NNTGCAKNNN
NNNMTGCANN
PBM
Weirauch et al.(2014)
pTH9236
0.666
0.793
stuA
M09761_2.00
Aspergillus nidulans
DBDCGCGWWB
VWWCGCGHVH
Transfac
Matys et al.(2006)
F$STUAP_01
0.666
0.793
SOK2
M00007_2.00
Saccharomyces cerevisiae
NCMTGCAKGNN
NNCMTGCAKGN
PBM
Badis et al.(2008)
SOK2_4560
0.659
0.747
SOK2
M07438_2.00
Saccharomyces cerevisiae
NNBMTGCAKNN
NNMTGCAKVNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0385.1
0.659
0.747
SOK2
M08477_2.00
Saccharomyces cerevisiae
HNBCTGCR
YGCAGVND
Misc
DeBoer et al.(2011)
YMR016C_404
0.659
0.747
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAG80478
APSES
276
367
FQVEARGICVARREDNDMINGTKLLNVAGMTRGRRDGILKGEKLRHVVKAGAMHLKGVWIPYDRALEFANKEKIIDLLFPLFVRDIKSVLYH
Links
Other
APSES
family TFs
Other
Yarrowia lipolytica
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy