SWI4 (Saccharomyces cerevisiae)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 YER111C T012463_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SWI4
M00004_2.00		 Saccharomyces cerevisiae
RACGCGWW
WWCGCGTY		 PBM
Badis et al.(2008)
SWI4_4482		 (Direct) (Direct)
SWI4
M07435_2.00		 Saccharomyces cerevisiae
DCGCGAAW
WTTCGCGH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0401.1		 (Direct) (Direct)
SWI4
M08473_2.00		 Saccharomyces cerevisiae
DCGCGAAW
WTTCGCGH		 Misc
DeBoer et al.(2011)
YER111C_584		 (Direct) (Direct)
SWI4
M09762_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$SWI4_Q6_01		 (Direct) (Direct)
SWI4
M09763_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$SWI4_Q6		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.650 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00004_2.00 APSES 43 133

DNA Binding Domains

Protein ID Domain From To Sequence
YER111C APSES 52 142

Links

Other APSES family TFs
Other Saccharomyces cerevisiae TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
6569_YER111C Saccharomyces paradoxus 6569_YER111C I 0.867
6438_YER111C Saccharomyces mikatae 6438_YER111C I 0.867
6809_YER111C Saccharomyces bayanus 6809_YER111C I 0.837
SU7_0916 Saccharomyces arboricola SU7_0916 I 0.819
TBLA_0D00490 Tetrapisispora blattae TBLA_0D00490 I 0.730
SAKL0F12870g Lachancea kluyveri SAKL0F12870g I 0.710
CAGL0A04565g Candida glabrata CAGL0A04565g I 0.689
ZBAI_06045 Zygosaccharomyces bailii ZBAI_06045 I 0.685
ZBAI_00748 Zygosaccharomyces bailii ZBAI_00748 I 0.685
ZYRO0B03740g Zygosaccharomyces rouxii ZYRO0B03740g I 0.683
Kpol_1045p30 Vanderwaltozyma polyspora Kpol_1045p30 I 0.675
TDEL_0C02690 Torulaspora delbrueckii TDEL_0C02690 I 0.674
Kpol_1018p105 Vanderwaltozyma polyspora Kpol_1018p105 I 0.668
KAFR_0K01930 Kazachstania africana KAFR_0K01930 I 0.665
Kwal_10756 Kluyveromyces waltii Kwal_10756 I 0.657
LALA0_S01e06304g Lachancea lanzarotensis LALA0_S01e06304g I 0.651