CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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Asm-1
(
Neurospora crassa
)
APSES
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04383 (KilA-N)
IPR018004
NCU01414
T013940_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.5.76.1
M01652_2.00
Nectria haematococca
NNVTGCABNN
NNVTGCABNN
PBM
Weirauch et al.(2014)
pTH9267
0.860
0.952
HCAG_07413
M01651_2.00
Histoplasma capsulatum
NNNHRYDNNN
NNNHRYDNNN
PBM
Weirauch et al.(2014)
pTH9346
0.831
0.916
stuA
M01649_2.00
Aspergillus nidulans
NNTGCAKNNN
NNNMTGCANN
PBM
Weirauch et al.(2014)
pTH9236
0.724
0.855
stuA
M09761_2.00
Aspergillus nidulans
DBDCGCGWWB
VWWCGCGHVH
Transfac
Matys et al.(2006)
F$STUAP_01
0.724
0.855
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU01414
APSES
130
217
FQVEARGICVARREDNAMINGTKLLNVAGMTRGRRDGILKSEKVRHVVKIGPMHLKGVWIPFERALDFANKEKITELLYPLFVHNIGA
Links
Other
APSES
family TFs
Other
Neurospora crassa
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy