16462_YMR016C (Saccharomyces mikatae)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 16462_YMR016C T013954_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SOK2
M00007_2.00
Saccharomyces cerevisiae
NCMTGCAKGNN

NNCMTGCAKGN
PBM
Badis et al.(2008)
SOK2_4560
0.851 0.977
SOK2
M07438_2.00
Saccharomyces cerevisiae
NNBMTGCAKNN

NNMTGCAKVNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0385.1
0.851 0.977
SOK2
M08477_2.00
Saccharomyces cerevisiae
HNBCTGCR

YGCAGVND
Misc
DeBoer et al.(2011)
YMR016C_404
0.851 0.977
PHD1
M00006_2.00
Saccharomyces cerevisiae
GMTGCAKG

CMTGCAKC
PBM
Badis et al.(2008)
PHD1_4559
0.658 0.770
PHD1
M01516_2.00
Saccharomyces cerevisiae
NBMTGCANN

NNTGCAKVN
PBM
Zhu et al.(2009)
Phd1
0.658 0.770
PHD1
M07437_2.00
Saccharomyces cerevisiae
NSMTGCABNN

NNVTGCAKSN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0355.1
0.658 0.770
PHD1
M07547_2.00
Saccharomyces cerevisiae
VCACACCCACACMCCACACMCNNMCVCH

DGBGKNNGKGTGTGGKGTGTGGGTGTGB
ChIP-exo
Rhee et al.(2011)
Phd1_1
0.658 0.770
PHD1
M07548_2.00
Saccharomyces cerevisiae
MYGCRC

GYGCRK
ChIP-exo
Rhee et al.(2011)
Phd1_2
0.658 0.770
PHD1
M07549_2.00
Saccharomyces cerevisiae
TAGCCGCCGAR

YTCGGCGGCTA
ChIP-exo
Rhee et al.(2011)
Phd1_3
0.658 0.770
PHD1
M08475_2.00
Saccharomyces cerevisiae
SCNGCRGG

CCYGCNGS
Misc
DeBoer et al.(2011)
YKL043W_393
0.658 0.770
PHD1
M08476_2.00
Saccharomyces cerevisiae
NSMTGCABNN

NNVTGCAKSN
Misc
DeBoer et al.(2011)
YKL043W_554
0.658 0.770
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
16462_YMR016C APSES 431 522

Links

Other APSES family TFs
Other Saccharomyces mikatae TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I 0.875
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I 0.863
SOK2 Saccharomyces cerevisiae YMR016C D 0.851
17269_YMR016C Saccharomyces paradoxus 17269_YMR016C I 0.851
SU7_2504 Saccharomyces arboricola SU7_2504 I 0.834
ZYRO0E06248g Zygosaccharomyces rouxii ZYRO0E06248g I 0.776
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I 0.771
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.768
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I 0.764
Kwal_8176 Kluyveromyces waltii Kwal_8176 I 0.763
TDEL_0B06530 Torulaspora delbrueckii TDEL_0B06530 I 0.758
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I 0.745
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I 0.745
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.738
LALA0_S02e00628g Lachancea lanzarotensis LALA0_S02e00628g I 0.737
XP_002490663.1 Pichia pastoris XP_002490663.1 I 0.731
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I 0.731
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I 0.722
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I 0.721
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I 0.716
ZBAI_08486 Zygosaccharomyces bailii ZBAI_08486 I 0.715
ZBAI_03487 Zygosaccharomyces bailii ZBAI_03487 I 0.715
Kpol_460p25 Vanderwaltozyma polyspora Kpol_460p25 I 0.715
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I 0.713
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I 0.711
JL09_g3139 Pichia kudriavzevii JL09_g3139 I 0.710
CAGL0L01771g Candida glabrata CAGL0L01771g I 0.704
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I 0.703
CLUG_02047 Clavispora lusitaniae CLUG_02047 I 0.697
CLUG_02047 Candida lusitaniae CLUG_02047 I 0.697
SKUD_205603 Saccharomyces kudriavzevii SKUD_205603 I 0.687
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I 0.684
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I 0.678
CaO19.610 Candida albicans CaO19.610 I 0.678
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I 0.678
G210_4810 Candida maltosa G210_4810 I 0.678
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I 0.678
CPAG_00178 Candida parapsilosis CPAG_00178 I 0.678
PGUG_03651 Candida guilliermondii PGUG_03651 I 0.678
PICST_67427 Scheffersomyces stipitis PICST_67427 I 0.678
LELG_05390 Lodderomyces elongisporus LELG_05390 I 0.678
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I 0.678
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I 0.678
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I 0.678
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I 0.678
CD36_33560 Candida dubliniensis CD36_33560 I 0.678
CaO19.8243 Candida albicans CaO19.8243 I 0.678
13647_YKL043W Saccharomyces paradoxus 13647_YKL043W I 0.676
KLTH0D07876g Lachancea thermotolerans KLTH0D07876g I 0.673
KLTH0D07876g Kluyveromyces thermotolerans KLTH0D07876g I 0.673
NDAI_0K01760 Naumovozyma dairenensis NDAI_0K01760 I 0.661
PHD1 Saccharomyces cerevisiae YKL043W D 0.658
SU7_2011 Saccharomyces arboricola SU7_2011 I 0.657