estExt_Genewise1Plus.C_70173 (Tremella mesenterica)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 estExt_Genewise1Plus.C_70173 T013976_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU07587
M01654_2.00
Neurospora crassa
NNNDCRCGN

NCGYGHNNN
PBM
Weirauch et al.(2014)
pTH9687
0.660 0.557
MBP1
M00003_2.00
Saccharomyces cerevisiae
VACGCGWD

HWCGCGTB
PBM
Badis et al.(2008)
MBP1_4486
0.660 0.481
MBP1
M01514_2.00
Saccharomyces cerevisiae
NNNNDCRCGH

DCGYGHNNNN
PBM
Zhu et al.(2009)
Mbp1
0.660 0.481
MBP1
M07434_2.00
Saccharomyces cerevisiae
NDCGCGH

DCGCGHN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1
0.660 0.481
MBP1
M08472_2.00
Saccharomyces cerevisiae
NDCGCGH

DCGCGHN
Misc
DeBoer et al.(2011)
YDL056W_500
0.660 0.481
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00
PBM CONSTRUCTS
NNACGCGW

WCGCGTNN
PBM
Lambert et al.(2019)
pTH9838
0.652 0.544
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_70173 APSES 125 206

Links

Other APSES family TFs
Other Tremella mesenterica TFs

Invalid Input OrderBy

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action