XP_002490663.1 (Pichia pastoris)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 XP_002490663.1 T014000_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SOK2
M00007_2.00 		Saccharomyces cerevisiae
NCMTGCAKGNN
NNCMTGCAKGN		 PBM
Badis et al.(2008)
SOK2_4560 		0.702 0.793
SOK2
M07438_2.00 		Saccharomyces cerevisiae
NNBMTGCAKNN
NNMTGCAKVNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0385.1 		0.702 0.793
SOK2
M08477_2.00 		Saccharomyces cerevisiae
HNBCTGCR
YGCAGVND		 Misc
DeBoer et al.(2011)
YMR016C_404 		0.702 0.793
PHD1
M00006_2.00 		Saccharomyces cerevisiae
GMTGCAKG
CMTGCAKC		 PBM
Badis et al.(2008)
PHD1_4559 		0.691 0.770
PHD1
M01516_2.00 		Saccharomyces cerevisiae
NBMTGCANN
NNTGCAKVN		 PBM
Zhu et al.(2009)
Phd1 		0.691 0.770
PHD1
M07437_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0355.1 		0.691 0.770
PHD1
M07547_2.00 		Saccharomyces cerevisiae
VCACACCCACACMCCACACMCNNMCVCH
DGBGKNNGKGTGTGGKGTGTGGGTGTGB		 ChIP-exo
Rhee et al.(2011)
Phd1_1 		0.691 0.770
PHD1
M07548_2.00 		Saccharomyces cerevisiae
MYGCRC
GYGCRK		 ChIP-exo
Rhee et al.(2011)
Phd1_2 		0.691 0.770
PHD1
M07549_2.00 		Saccharomyces cerevisiae
TAGCCGCCGAR
YTCGGCGGCTA		 ChIP-exo
Rhee et al.(2011)
Phd1_3 		0.691 0.770
PHD1
M08475_2.00 		Saccharomyces cerevisiae
SCNGCRGG
CCYGCNGS		 Misc
DeBoer et al.(2011)
YKL043W_393 		0.691 0.770
PHD1
M08476_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 Misc
DeBoer et al.(2011)
YKL043W_554 		0.691 0.770
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002490663.1 APSES 296 387

Links

Other APSES family TFs
Other Pichia pastoris TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I 0.880
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.845
CLUG_02047 Candida lusitaniae CLUG_02047 I 0.804
CLUG_02047 Clavispora lusitaniae CLUG_02047 I 0.804
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I 0.798
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I 0.795
G210_4810 Candida maltosa G210_4810 I 0.786
PICST_67427 Scheffersomyces stipitis PICST_67427 I 0.786
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I 0.786
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I 0.786
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I 0.786
CPAG_00178 Candida parapsilosis CPAG_00178 I 0.786
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I 0.786
CaO19.610 Candida albicans CaO19.610 I 0.786
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I 0.786
CaO19.8243 Candida albicans CaO19.8243 I 0.786
CD36_33560 Candida dubliniensis CD36_33560 I 0.786
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I 0.786
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I 0.774
PGUG_03651 Candida guilliermondii PGUG_03651 I 0.774
Kwal_8176 Kluyveromyces waltii Kwal_8176 I 0.773
LELG_05390 Lodderomyces elongisporus LELG_05390 I 0.773
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I 0.768
LALA0_S02e00628g Lachancea lanzarotensis LALA0_S02e00628g I 0.759
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I 0.756
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.746
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I 0.743
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I 0.743
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I 0.737
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I 0.737
16462_YMR016C Saccharomyces mikatae 16462_YMR016C I 0.731
JL09_g3139 Pichia kudriavzevii JL09_g3139 I 0.728
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I 0.728
TDEL_0B06530 Torulaspora delbrueckii TDEL_0B06530 I 0.712
13647_YKL043W Saccharomyces paradoxus 13647_YKL043W I 0.710
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I 0.710
ZYRO0E06248g Zygosaccharomyces rouxii ZYRO0E06248g I 0.709
SU7_2504 Saccharomyces arboricola SU7_2504 I 0.708
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I 0.707
KLTH0D07876g Kluyveromyces thermotolerans KLTH0D07876g I 0.704
KLTH0D07876g Lachancea thermotolerans KLTH0D07876g I 0.704
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I 0.702
SOK2 Saccharomyces cerevisiae YMR016C D 0.702
17269_YMR016C Saccharomyces paradoxus 17269_YMR016C I 0.702
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I 0.699
SKUD_205603 Saccharomyces kudriavzevii SKUD_205603 I 0.697
PHD1 Saccharomyces cerevisiae YKL043W D 0.691
SU7_2011 Saccharomyces arboricola SU7_2011 I 0.690
CAGL0L01771g Candida glabrata CAGL0L01771g I 0.682
ZBAI_03487 Zygosaccharomyces bailii ZBAI_03487 I 0.682
ZBAI_08486 Zygosaccharomyces bailii ZBAI_08486 I 0.682
YALI0_B19602g Yarrowia lipolytica YALI0_B19602g I 0.661
EV44_g0662 Erysiphe necator EV44_g0662 I 0.653
NCAS_0A04710 Naumovozyma castellii NCAS_0A04710 I 0.651
Scas_Contig625.8 Saccharomyces castellii Scas_Contig625.8 I 0.651