ARID6 (Arabidopsis thaliana)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 AT1G20910 T014149_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARID6
M06694_2.00
Arabidopsis thaliana
HAATTRAWTTN

NAAWTYAATTD
Dap-seq
OMalley et al.(2016)
AT1G20910_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARID3
M06695_2.00
Arabidopsis thaliana
AAWWHNAAATYAAWW

WWTTRATTTNDWWTT
Dap-seq
OMalley et al.(2016)
AT2G17410_col_a
0.591 0.718
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G20910.1 ARID/BRIGHT 108 193
AT1G20910.2 ARID/BRIGHT 108 193

Links

Other ARID/BRIGHT family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action