CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra015737
(
Brassica rapa
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
Bra015737
T014224_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra015737.1-P
ARID/BRIGHT
82
216
DQQAFIKEVEAYNKENFLDFKAPKFYGQPLNCLKLWRAVIKLGGYDVSLLEYEKHLRQNGELNLPGLPVLPPAGLEKEAISHQGSGSGRARRDAAARAMQGWHSQRLLESGDVTEPIVKDKGLSSTPKQKNLKNI
Links
Other
ARID/BRIGHT
family TFs
Other
Brassica rapa
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene11760-v1.0-hybrid
Fragaria vesca
gene11760-v1.0-hybrid
N
0.748
Pavir.J25952
Panicum virgatum
Pavir.J25952
N
0.705
evm.TU.supercontig_70.18
Carica papaya
evm.TU.supercontig_70.18
N
0.668
ORGLA07G0233500
Oryza glaberrima
ORGLA07G0233500
N
0.668
PDK_20s1315202g001
Phoenix dactylifera
PDK_20s1315202g001
N
0.668
MLOC_7381
Hordeum vulgare
MLOC_7381
N
0.667
MESCA003685
Megaselia scalaris
MESCA003685
N
0.653
orange1.1g009744m.g
Citrus sinensis
orange1.1g009744m.g
I
0.635
TRIUR3_29596
Triticum urartu
TRIUR3_29596
N
0.631
Pavir.Da00612
Panicum virgatum
Pavir.Da00612
N
0.627
ENSCSAVG00000005880
Ciona savignyi
ENSCSAVG00000005880
N
0.621
e_gw1.8.356.1
Monosiga brevicollis
e_gw1.8.356.1
N
0.618
GD20218
Drosophila simulans
FBgn0191696
N
0.616
GL12242
Drosophila persimilis
FBgn0149849
N
0.616
ACOM023832
Anopheles coluzzii
ACOM023832
N
0.616
SPER_0003827801
Spirometra erinaceieuropaei
SPER_0003827801
N
0.610
SPER_0003392901
Spirometra erinaceieuropaei
SPER_0003392901
N
0.610
SROB_0001561301
Schistosoma rodhaini
SROB_0001561301
N
0.610
Sjc_0111140
Schistosoma japonicum
Sjc_0111140
N
0.610
SPER_0000246801
Spirometra erinaceieuropaei
SPER_0000246801
N
0.610
SMTD_0000131801
Schistosoma mattheei
SMTD_0000131801
N
0.610
PGSC0003DMG400047019
Solanum tuberosum
PGSC0003DMG400047019
N
0.609
HHAL003716-PA
Halyomorpha halys
HHAL003716-PA
N
0.607
F775_22367
Aegilops tauschii
F775_22367
N
0.606
OS06G0622300
Oryza sativa
OS06G0622300
I
0.606
Genemark1.2983_g
Coccomyxa subellipsoidea C169
Genemark1.2983_g
N
0.596
SBAD_0000429301
Soboliphyme baturini
SBAD_0000429301
N
0.596
ENSCJAG00000034027
Callithrix jacchus
ENSCJAG00000034027
N
0.596
Solyc12g038740.1
Solanum lycopersicum
Solyc12g038740.1
N
0.567
SPU_003500
Strongylocentrotus purpuratus
SPU_003500
N
0.559
Cflo_11029--XP_001120115.1_APIME
Camponotus floridanus
Cflo_11029--XP_001120115.1_APIME
N
0.559
PGSC0003DMG401018896
Solanum tuberosum
PGSC0003DMG401018896
N
0.554
PHUM027610
Pediculus humanus
PHUM027610
N
0.545
Traes_2AS_40ED2C7BC
Triticum aestivum
Traes_2AS_40ED2C7BC
N
0.545
ANCCAN_16550
Ancylostoma caninum
ANCCAN_16550
N
0.538
SMTD_0001549501
Schistosoma mattheei
SMTD_0001549501
N
0.537
TRE_0000846701
Trichobilharzia regenti
TRE_0000846701
N
0.537
HCOI00647600
Haemonchus contortus
HCOI00647600
N
0.537
ARID5A
Microcebus murinus
ENSMICG00000001964
I
0.536
ARID5A
Sorex araneus
ENSSARG00000003004
I
0.536
Genemark.397_g
Heterobasidion annosum
Genemark.397_g
N
0.532
SapurV1A.0216s0430
Salix purpurea
SapurV1A.0216s0430
N
0.528
SapurV1A.2929s0030
Salix purpurea
SapurV1A.2929s0030
N
0.528
HPBE_0000220801
Heligmosomoides bakeri
HPBE_0000220801
N
0.526
OESDEN_17751
Oesophagostomum dentatum
OESDEN_17751
N
0.524
ACEP25970
Atta cephalotes
ACEP25970
N
0.522
ACRE_008210
Acremonium chrysogenum
ACRE_008210
N
0.512
SVUK_0000804601
Strongylus vulgaris
SVUK_0000804601
N
0.500
MCINX010724
Melitaea cinxia
MCINX010724
N
0.500
YQE_11989
Dendroctonus ponderosae
YQE_11989
N
0.500
Hsal_11763--XP_001120115.1_APIME
Harpegnathos saltator
Hsal_11763--XP_001120115.1_APIME
N
0.500
PHACADRAFT_251691
Phanerochaete carnosa
PHACADRAFT_251691
N
0.498
BOTBODRAFT_174219
Botryobasidium botryosum
BOTBODRAFT_174219
N
0.493
F775_31416
Aegilops tauschii
F775_31416
N
0.491
ARID5B
Tursiops truncatus
ENSTTRG00000009968
N
0.490
GG.C169_S05_00378
Chlorella vulgaris
GG.C169_S05_00378
N
0.487
Solyc04g025930.1
Solanum lycopersicum
Solyc04g025930.1
N
0.486
NV31651
Nasonia vitripennis
NV31651
N
0.477
Aan_R005479
Calypte anna
Aan_R005479
N
0.476
GK21672
Drosophila willistoni
FBgn0223657
N
0.475
Bo4g012540
Brassica oleracea
Bo4g012540
N
0.473
Myotis_brandtii_KDM5D_10002268
Myotis brandtii
Myotis_brandtii_KDM5D_10002268
N
0.457
BOTBODRAFT_182015
Botryobasidium botryosum
BOTBODRAFT_182015
N
0.452
Myotis_brandtii_ARID2_10029491
Myotis brandtii
Myotis_brandtii_ARID2_10029491
N
0.447
SPER_0000445801
Spirometra erinaceieuropaei
SPER_0000445801
N
0.433
SPU_009801
Strongylocentrotus purpuratus
SPU_009801
N
0.433
Myotis_brandtii_Arid3c_10010321
Myotis brandtii
Myotis_brandtii_Arid3c_10010321
N
0.433
cassava33852.m1
Manihot esculenta
cassava33852.m1
N
0.433
ASIM_0001975501
Anisakis simplex
ASIM_0001975501
N
0.433
cassava32082.m1
Manihot esculenta
cassava32082.m1
N
0.433
Lus10008531.g
Linum usitatissimum
Lus10008531.g
N
0.433
Gfo_R015467
Geospiza fortis
Gfo_R015467
N
0.431
BOTBODRAFT_44712
Botryobasidium botryosum
BOTBODRAFT_44712
N
0.429
CapteG108943
Capitella teleta
CapteG108943
N
0.429
ENSAMEG00000013019
Ailuropoda melanoleuca
ENSAMEG00000013019
N
0.426
OFLC_0000209301
Onchocerca flexuosa
OFLC_0000209301
N
0.423