CMM307C (Cyanidioschyzon merolae)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 CMM307C T014330_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ACYPI009013
M01655_2.00
Acyrthosiphon pisum
NDATHAADN

NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5117
0.462 0.349
retn
M01664_2.00
Drosophila melanogaster
NDATHRNN

NNYDATHN
PBM
Weirauch et al.(2014)
pTH5119
0.462 0.349
retn
M03590_2.00
Drosophila melanogaster
NNATTRATHN

NDATYAATNN
SELEX
Nitta et al.(2015)
retn_1
0.462 0.349
retn
M05899_2.00
Drosophila melanogaster
AATYAAAM

KTTTRATT
B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795
0.462 0.349
retn
M09768_2.00
Drosophila melanogaster
NNRATTAADN

NHTTAATYNN
Transfac
Matys et al.(2006)
I$DRI_01
0.462 0.349
DDB_G0275333
M01656_2.00
Dictyostelium discoideum
NNATHDNNNN

NNNNHDATNN
PBM
Weirauch et al.(2014)
pTH5168
0.448 0.326
cfi-1
M01667_2.00
Caenorhabditis elegans
NNATHDNN

NNHDATNN
PBM
Weirauch et al.(2014)
pTH5118
0.434 0.326
Arid3b
M01659_2.00
Mus musculus
NNDATTAAWWN

NWWTTAATHNN
PBM
Weirauch et al.(2014)
pTH4425
0.434 0.314
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CMM307CT ARID/BRIGHT 119 205

Links

Other ARID/BRIGHT family TFs
Other Cyanidioschyzon merolae TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_063340 Acremonium chrysogenum ACRE_063340 I 0.000
AOL_s00215g23 Arthrobotrys oligospora AOL_s00215g23 I 0.000
AUEXF2481DRAFT_200794 Aureobasidium subglaciale AUEXF2481DRAFT_200794 I 0.000
BAUCODRAFT_123202 Baudoinia compniacensis BAUCODRAFT_123202 I 0.000
BBA_05156 Beauveria bassiana BBA_05156 I 0.000
Bcin01g01680 Botrytis cinerea Bcin01g01680 I 0.000
CFIO01_00459 Colletotrichum fioriniae CFIO01_00459 I 0.000
CGGC5_12311 Colletotrichum gloeosporioides CGGC5_12311 I 0.000
CH063_09856 Colletotrichum higginsianum CH063_09856 I 0.000
CHGG_04631 Chaetomium globosum CHGG_04631 I 0.000
CMQ_3812 Grosmannia clavigera CMQ_3812 I 0.000
Cob_10480 Colletotrichum orbiculare Cob_10480 I 0.000
COCC4DRAFT_82054 Bipolaris maydis COCC4DRAFT_82054 I 0.000
COCCADRAFT_96484 Bipolaris zeicola COCCADRAFT_96484 I 0.000
COCMIDRAFT_79558 Bipolaris oryzae COCMIDRAFT_79558 I 0.000
COCSADRAFT_84232 Bipolaris sorokiniana COCSADRAFT_84232 I 0.000
COCVIDRAFT_30945 Bipolaris victoriae COCVIDRAFT_30945 I 0.000
CPUR_01500 Claviceps purpurea CPUR_01500 I 0.000
CSUB01_02028 Colletotrichum sublineola CSUB01_02028 I 0.000
DRE_03937 Drechslerella stenobrocha DRE_03937 I 0.000
estExt_fgenesh1_pg.C_30644 Cryphonectria parasitica estExt_fgenesh1_pg.C_30644 I 0.000
estExt_fgenesh1_pm.C_chr_60224 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_60224 I 0.000
estExt_Genewise1.C_31390 Neurospora discreta estExt_Genewise1.C_31390 I 0.000
estExt_Genewise1Plus.C_160056 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_160056 I 0.000
e_gw1.18.1708.1 Nectria haematococca e_gw1.18.1708.1 I 0.000
F503_05241 Ophiostoma piceae uamh F503_05241 I 0.000
FFUJ_05056 Fusarium fujikuroi FFUJ_05056 I 0.000
FGRRES_17645 Fusarium graminearum FGRRES_17645 I 0.000
FOXG_08626 Fusarium oxysporum FOXG_08626 I 0.000
FPSE_04959 Fusarium pseudograminearum FPSE_04959 I 0.000
FVEG_06046 Fusarium verticillioides FVEG_06046 I 0.000
GGTG_02776 Gaeumannomyces graminis GGTG_02776 I 0.000
GLRG_08331 Colletotrichum graminicola GLRG_08331 I 0.000
H072_3680 Dactylellina haptotyla H072_3680 I 0.000
HMPREF1624_03268 Sporothrix schenckii HMPREF1624_03268 I 0.000
LEMA_P007120.1 Leptosphaeria maculans LEMA_P007120.1 I 0.000
M437DRAFT_69578 Aureobasidium melanogenum M437DRAFT_69578 I 0.000
M438DRAFT_301560 Aureobasidium pullulans M438DRAFT_301560 I 0.000
MAJ_01818 Metarhizium majus MAJ_01818 I 0.000
MAPG_01726 Magnaporthe poae MAPG_01726 I 0.000
MBM_07850 Marssonina brunnea MBM_07850 I 0.000
MBR_00455 Metarhizium brunneum MBR_00455 I 0.000
MGG_01734 Magnaporthe oryzae MGG_01734 I 0.000
MGU_01088 Metarhizium guizhouense MGU_01088 I 0.000
MPH_13649 Macrophomina phaseolina MPH_13649 I 0.000
Mycgr3G100535 Zymoseptoria tritici Mycgr3G100535 I 0.000
MYCTH_2298863 Myceliophthora thermophila MYCTH_2298863 I 0.000
clr-1 Neurospora crassa NCU07705 D 0.000
NechaG32419 Fusarium solani NechaG32419 I 0.000
NEUTE1DRAFT_78712 Neurospora tetrasperma NEUTE1DRAFT_78712 I 0.000
OIDMADRAFT_109343 Oidiodendron maius OIDMADRAFT_109343 I 0.000
PFICI_04537 Pestalotiopsis fici PFICI_04537 I 0.000
PODANS_6_2840 Podospora anserina PODANS_6_2840 I 0.000
PTT_14843 Pyrenophora teres PTT_14843 I 0.000
PV09_03439 Verruconis gallopava PV09_03439 I 0.000
S40285_00264 Stachybotrys chlorohalonata S40285_00264 I 0.000
S40288_06279 Stachybotrys chartarum S40288_06279 I 0.000
SAPIO_CDS7108 Scedosporium apiospermum SAPIO_CDS7108 I 0.000
SBOR_2384 Sclerotinia borealis SBOR_2384 I 0.000
SEPMUDRAFT_163837 Sphaerulina musiva SEPMUDRAFT_163837 I 0.000
SETTUDRAFT_20488 Setosphaeria turcica SETTUDRAFT_20488 I 0.000
SMAC_00847 Sordaria macrospora SMAC_00847 I 0.000
SNOG_03108 Stagonospora nodorum SNOG_03108 I 0.000
SPBR_01382 Sporothrix brasiliensis SPBR_01382 I 0.000
SS1G_13144 Sclerotinia sclerotiorum SS1G_13144 I 0.000
THITE_2115249 Thielavia terrestris THITE_2115249 I 0.000
UCREL1_3643 Eutypa lata UCREL1_3643 I 0.000
UCRNP2_7317 Neofusicoccum parvum UCRNP2_7317 I 0.000
V499_08273 Pseudogymnoascus pannorum V499_08273 I 0.000
VDAG_00432 Verticillium dahliae VDAG_00432 I 0.000
VDBG_00821 Verticillium alfalfae VDBG_00821 I 0.000
VDBG_00821 Verticillium albo atrum VDBG_00821 I 0.000
VHEMI03626 Torrubiella hemipterigena VHEMI03626 I 0.000