ARID5A (Felis catus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSFCAG00000024950 T014539_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN

NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.785 0.988
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN

NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.785 0.988
arid6
M01657_2.00
Danio rerio
NNRWATYN

NRATWYNN
PBM
Weirauch et al.(2014)
pTH5120
0.649 0.647
Arid5b
M01661_2.00
Mus musculus
NDATWHNN

NNDWATHN
PBM
Weirauch et al.(2014)
pTH4426
0.632 0.753
ARID5B
M08707_2.00
Homo sapiens
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C
0.632 0.753
Arid5b
M08708_2.00
Mus musculus
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C
0.632 0.753
ARID5B
M09767_2.00
Homo sapiens
KBDGTATTGTRSWB

VWSYACAATACHVM
Transfac
Matys et al.(2006)
V$MRF2_01
0.632 0.753
e_gw.4.260.1_CONSTRUCT
M01668_2.00
PBM CONSTRUCTS
NNNDATHNNN

NNNDATHNNN
PBM
Weirauch et al.(2014)
pTH5122
0.493 0.600
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFCAP00000017715 ARID/BRIGHT 18 103

Links

Other ARID/BRIGHT family TFs
Other Felis catus TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30169.m006403 Ricinus communis 30169.m006403 I 0.000
BHLH128 Arabidopsis thaliana AT1G05805 I 0.000
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.000
BGIOSGA004992 Oryza indica BGIOSGA004992 I 0.000
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.000
Bo5g006980 Brassica oleracea Bo5g006980 I 0.000
Bo5g007030 Brassica oleracea Bo5g007030 I 0.000
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I 0.000
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I 0.000
Bra015456 Brassica rapa Bra015456 I 0.000
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I 0.000
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.000
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I 0.000
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.000
Carubv10009382m.g Capsella rubella Carubv10009382m.g I 0.000
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.000
Ca_07284 Cicer arietinum Ca_07284 I 0.000
Ca_14007 Cicer arietinum Ca_14007 I 0.000
Ciclev10020681m.g Citrus clementina Ciclev10020681m.g I 0.000
Cucsa.094340 Cucumis sativus Cucsa.094340 I 0.000
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I 0.000
e_gw1.272.41.1 Physcomitrella patens e_gw1.272.41.1 I 0.000
F775_24576 Aegilops tauschii F775_24576 I 0.000
F775_26506 Aegilops tauschii F775_26506 I 0.000
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I 0.000
GRMZM2G114873 Zea mays GRMZM2G114873 I 0.000
GSMUA_Achr1G27710_001 Musa acuminata GSMUA_Achr1G27710_001 I 0.000
GSMUA_Achr8G01370_001 Musa acuminata GSMUA_Achr8G01370_001 I 0.000
GSMUA_Achr8G32130_001 Musa acuminata GSMUA_Achr8G32130_001 I 0.000
LPERR01G35240 Leersia perrieri LPERR01G35240 I 0.000
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.000
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.000
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.000
Lus10025518.g Linum usitatissimum Lus10025518.g I 0.000
Lus10026733.g Linum usitatissimum Lus10026733.g I 0.000
MDP0000307685 Malus domestica MDP0000307685 I 0.000
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.000
MLOC_20318 Hordeum vulgare MLOC_20318 I 0.000
MTR_1g116790 Medicago truncatula MTR_1g116790 I 0.000
OB01G49420 Oryza brachyantha OB01G49420 I 0.000
OB04G24170 Oryza brachyantha OB04G24170 I 0.000
OBART01G40680 Oryza barthii OBART01G40680 I 0.000
OBART04G16900 Oryza barthii OBART04G16900 I 0.000
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I 0.000
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.000
OMERI01G37660 Oryza meridionalis OMERI01G37660 I 0.000
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.000
ONIVA01G45730 Oryza nivara ONIVA01G45730 I 0.000
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.000
OPUNC01G39450 Oryza punctata OPUNC01G39450 I 0.000
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.000
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I 0.000
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I 0.000
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.000
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I 0.000
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.000
OS01G0900800 Oryza sativa OS01G0900800 I 0.000
OS04G0489600 Oryza sativa OS04G0489600 I 0.000
Pavir.J01306 Panicum virgatum Pavir.J01306 I 0.000
PDK_20s1546591g001 Phoenix dactylifera PDK_20s1546591g001 I 0.000
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.000
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.000
Sb03g042860 Sorghum bicolor Sb03g042860 I 0.000
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.000
Si001123m.g Setaria italica Si001123m.g I 0.000
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I 0.000
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I 0.000
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I 0.000
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I 0.000
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I 0.000
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I 0.000
TRIUR3_16394 Triticum urartu TRIUR3_16394 I 0.000
TRIUR3_33816 Triticum urartu TRIUR3_33816 I 0.000
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.000