CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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arid4a
(
Gasterosteus aculeatus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
ENSGACG00000004018
T014549_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000005282
ARID/BRIGHT
306
392
ERDRFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYRLGGCHKIESGTVWKQVYVDLGIPVLNSAASYNVKTAYKKYLYGFE
ENSGACP00000005290
ARID/BRIGHT
309
395
ERDRFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYRLGGCHKIESGTVWKQVYVDLGIPVLNSAASYNVKTAYKKYLYGFE
Links
Other
ARID/BRIGHT
family TFs
Other
Gasterosteus aculeatus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSXMAG00000004904
Xiphophorus maculatus
ENSXMAG00000004904
N
0.740
ENSPFOG00000018637
Poecilia formosa
ENSPFOG00000018637
N
0.740
ENSOANG00000021731
Ornithorhynchus anatinus
ENSOANG00000021731
N
0.660
Arid4b
Rattus norvegicus
ENSRNOG00000049751
N
0.660
Cmyd_10007406
Chelonia mydas
Cmyd_10007406
N
0.580
Sakowv30029818m.g
Saccoglossus kowalevskii
Sakowv30029818m.g
N
0.563
ENSPMAG00000005734
Petromyzon marinus
ENSPMAG00000005734
N
0.485
ENSCING00000009489
Ciona intestinalis
ENSCING00000009489
N
0.457