ENSGMOG00000008075 (Gadus morhua)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSGMOG00000008075 T014574_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
arid6
M01657_2.00
Danio rerio
NNRWATYN

NRATWYNN
PBM
Weirauch et al.(2014)
pTH5120
0.758 0.849
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN

NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.663 0.663
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN

NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.663 0.663
Arid5b
M01661_2.00
Mus musculus
NDATWHNN

NNDWATHN
PBM
Weirauch et al.(2014)
pTH4426
0.592 0.616
ARID5B
M08707_2.00
Homo sapiens
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C
0.592 0.616
Arid5b
M08708_2.00
Mus musculus
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C
0.592 0.616
ARID5B
M09767_2.00
Homo sapiens
KBDGTATTGTRSWB

VWSYACAATACHVM
Transfac
Matys et al.(2006)
V$MRF2_01
0.592 0.616
e_gw.4.260.1_CONSTRUCT
M01668_2.00
PBM CONSTRUCTS
NNNDATHNNN

NNNDATHNNN
PBM
Weirauch et al.(2014)
pTH5122
0.475 0.558
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000008645 ARID/BRIGHT 17 103

Links

Other ARID/BRIGHT family TFs
Other Gadus morhua TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
16480_YMR213W Saccharomyces paradoxus 16480_YMR213W N 0.000
17212_YMR213W Saccharomyces mikatae 17212_YMR213W N 0.000
19101_YMR213W Saccharomyces bayanus 19101_YMR213W N 0.000
KAFR_0B03230 Kazachstania africana KAFR_0B03230 N 0.000
KLTH0D12452g Kluyveromyces thermotolerans KLTH0D12452g N 0.000
KLTH0D12452g Lachancea thermotolerans KLTH0D12452g N 0.000
NCAS_0C01050 Naumovozyma castellii NCAS_0C01050 N 0.000
NDAI_0K01050 Naumovozyma dairenensis NDAI_0K01050 N 0.000
TDEL_0B03810 Torulaspora delbrueckii TDEL_0B03810 N 0.000
TPHA_0G01400 Tetrapisispora phaffii TPHA_0G01400 N 0.000
ZBAI_00661 Zygosaccharomyces bailii ZBAI_00661 N 0.000
ZBAI_05956 Zygosaccharomyces bailii ZBAI_05956 N 0.000
ZYRO0F09526g Zygosaccharomyces rouxii ZYRO0F09526g N 0.000